Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS19915 and ABID97_RS19920 are separated by 4 nucleotides ABID97_RS19920 and ABID97_RS19925 are separated by 81 nucleotides ABID97_RS19925 and ABID97_RS19930 are separated by 95 nucleotides ABID97_RS19930 and ABID97_RS19935 are separated by 50 nucleotides
ABID97_RS19915: ABID97_RS19915 - lytic murein transglycosylase B, at 4,111,222 to 4,112,313
_RS19915
ABID97_RS19920: ABID97_RS19920 - N-methyl-D-aspartate receptor NMDAR2C subunit, at 4,112,318 to 4,112,944
_RS19920
ABID97_RS19925: ABID97_RS19925 - ABC transporter substrate-binding protein, at 4,113,026 to 4,114,756
_RS19925
ABID97_RS19930: ABID97_RS19930 - DUF2160 domain-containing protein, at 4,114,852 to 4,115,160
_RS19930
ABID97_RS19935: ABID97_RS19935 - carbohydrate ABC transporter permease, at 4,115,211 to 4,116,023
_RS19935
Position (kb)
4113
4114
4115 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4112.200 kb on + strand, within ABID97_RS19915 at 4112.200 kb on + strand, within ABID97_RS19915 at 4112.201 kb on - strand, within ABID97_RS19915 at 4112.225 kb on - strand at 4112.254 kb on + strand at 4112.254 kb on + strand at 4112.254 kb on + strand at 4112.254 kb on + strand at 4112.438 kb on + strand, within ABID97_RS19920 at 4112.550 kb on - strand, within ABID97_RS19920 at 4112.763 kb on - strand, within ABID97_RS19920 at 4113.070 kb on - strand at 4113.372 kb on + strand, within ABID97_RS19925 at 4113.507 kb on + strand, within ABID97_RS19925 at 4113.604 kb on - strand, within ABID97_RS19925 at 4113.702 kb on + strand, within ABID97_RS19925 at 4113.790 kb on - strand, within ABID97_RS19925 at 4113.810 kb on + strand, within ABID97_RS19925 at 4113.825 kb on + strand, within ABID97_RS19925 at 4114.131 kb on + strand, within ABID97_RS19925 at 4114.320 kb on + strand, within ABID97_RS19925 at 4114.321 kb on - strand, within ABID97_RS19925 at 4114.396 kb on - strand, within ABID97_RS19925 at 4114.522 kb on - strand, within ABID97_RS19925 at 4114.743 kb on + strand at 4114.744 kb on - strand at 4114.983 kb on - strand, within ABID97_RS19930 at 4115.209 kb on - strand at 4115.515 kb on + strand, within ABID97_RS19935 at 4115.515 kb on + strand, within ABID97_RS19935 at 4115.756 kb on - strand, within ABID97_RS19935 at 4115.756 kb on - strand, within ABID97_RS19935
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 4,112,200 + ABID97_RS19915 0.90 -0.8 4,112,200 + ABID97_RS19915 0.90 -0.5 4,112,201 - ABID97_RS19915 0.90 -0.0 4,112,225 - -0.8 4,112,254 + +0.7 4,112,254 + -0.7 4,112,254 + -0.5 4,112,254 + +1.4 4,112,438 + ABID97_RS19920 0.19 +0.5 4,112,550 - ABID97_RS19920 0.37 -0.3 4,112,763 - ABID97_RS19920 0.71 +0.1 4,113,070 - -0.3 4,113,372 + ABID97_RS19925 0.20 +0.0 4,113,507 + ABID97_RS19925 0.28 -1.0 4,113,604 - ABID97_RS19925 0.33 +0.2 4,113,702 + ABID97_RS19925 0.39 +0.0 4,113,790 - ABID97_RS19925 0.44 -0.5 4,113,810 + ABID97_RS19925 0.45 +0.3 4,113,825 + ABID97_RS19925 0.46 -2.8 4,114,131 + ABID97_RS19925 0.64 -1.5 4,114,320 + ABID97_RS19925 0.75 -1.6 4,114,321 - ABID97_RS19925 0.75 -0.6 4,114,396 - ABID97_RS19925 0.79 -0.1 4,114,522 - ABID97_RS19925 0.86 -0.5 4,114,743 + -0.5 4,114,744 - +0.6 4,114,983 - ABID97_RS19930 0.42 +0.2 4,115,209 - -0.9 4,115,515 + ABID97_RS19935 0.37 +0.4 4,115,515 + ABID97_RS19935 0.37 -1.4 4,115,756 - ABID97_RS19935 0.67 +0.0 4,115,756 - ABID97_RS19935 0.67 +0.4
Or see this region's nucleotide sequence