Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS18970 and ABID97_RS18975 are separated by 48 nucleotides ABID97_RS18975 and ABID97_RS18980 are separated by 93 nucleotides
ABID97_RS18970: ABID97_RS18970 - cytochrome P450, at 3,906,525 to 3,907,511
_RS18970
ABID97_RS18975: ABID97_RS18975 - ABC transporter substrate-binding protein, at 3,907,560 to 3,908,693
_RS18975
ABID97_RS18980: ABID97_RS18980 - SDR family oxidoreductase, at 3,908,787 to 3,909,572
_RS18980
Position (kb)
3907
3908
3909 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3906.895 kb on - strand, within ABID97_RS18970 at 3907.027 kb on + strand, within ABID97_RS18970 at 3907.065 kb on + strand, within ABID97_RS18970 at 3907.065 kb on + strand, within ABID97_RS18970 at 3907.536 kb on - strand at 3907.869 kb on - strand, within ABID97_RS18975 at 3907.869 kb on - strand, within ABID97_RS18975 at 3908.373 kb on + strand, within ABID97_RS18975 at 3908.374 kb on - strand, within ABID97_RS18975 at 3908.374 kb on - strand, within ABID97_RS18975 at 3908.436 kb on + strand, within ABID97_RS18975 at 3908.638 kb on - strand at 3908.638 kb on - strand at 3908.638 kb on - strand at 3908.815 kb on + strand at 3909.315 kb on + strand, within ABID97_RS18980 at 3909.316 kb on - strand, within ABID97_RS18980 at 3909.668 kb on + strand at 3909.668 kb on + strand at 3909.669 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 3,906,895 - ABID97_RS18970 0.37 +2.3 3,907,027 + ABID97_RS18970 0.51 -2.3 3,907,065 + ABID97_RS18970 0.55 -0.7 3,907,065 + ABID97_RS18970 0.55 +0.8 3,907,536 - +1.7 3,907,869 - ABID97_RS18975 0.27 -0.9 3,907,869 - ABID97_RS18975 0.27 -0.9 3,908,373 + ABID97_RS18975 0.72 -1.9 3,908,374 - ABID97_RS18975 0.72 +0.1 3,908,374 - ABID97_RS18975 0.72 +0.4 3,908,436 + ABID97_RS18975 0.77 -3.3 3,908,638 - -0.4 3,908,638 - -0.0 3,908,638 - -0.2 3,908,815 + -0.5 3,909,315 + ABID97_RS18980 0.67 +1.6 3,909,316 - ABID97_RS18980 0.67 -0.4 3,909,668 + +0.4 3,909,668 + +1.1 3,909,669 - -0.3
Or see this region's nucleotide sequence