Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS11170 and ABID97_RS11175 are separated by 151 nucleotides ABID97_RS11175 and ABID97_RS11180 are separated by 61 nucleotides ABID97_RS11180 and ABID97_RS11185 overlap by 4 nucleotides
ABID97_RS11170: ABID97_RS11170 - GntR family transcriptional regulator, at 2,310,713 to 2,311,384
_RS11170
ABID97_RS11175: ABID97_RS11175 - SDR family oxidoreductase, at 2,311,536 to 2,312,264
_RS11175
ABID97_RS11180: ABID97_RS11180 - NAD(P)H-quinone oxidoreductase, at 2,312,326 to 2,313,321
_RS11180
ABID97_RS11185: ABID97_RS11185 - transketolase C-terminal domain-containing protein, at 2,313,318 to 2,314,340
_RS11185
Position (kb)
2312
2313
2314 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2311.517 kb on + strand at 2311.530 kb on + strand at 2311.530 kb on + strand at 2311.531 kb on - strand at 2311.531 kb on - strand at 2311.531 kb on - strand at 2311.531 kb on - strand at 2311.541 kb on + strand at 2311.541 kb on + strand at 2311.541 kb on + strand at 2311.541 kb on + strand at 2311.541 kb on + strand at 2311.541 kb on + strand at 2311.542 kb on - strand at 2311.542 kb on - strand at 2311.542 kb on - strand at 2311.542 kb on - strand at 2312.214 kb on + strand at 2312.732 kb on + strand, within ABID97_RS11180 at 2312.732 kb on + strand, within ABID97_RS11180 at 2312.933 kb on + strand, within ABID97_RS11180 at 2312.933 kb on + strand, within ABID97_RS11180 at 2312.933 kb on + strand, within ABID97_RS11180 at 2312.934 kb on - strand, within ABID97_RS11180 at 2312.934 kb on - strand, within ABID97_RS11180 at 2312.934 kb on - strand, within ABID97_RS11180 at 2312.934 kb on - strand, within ABID97_RS11180 at 2313.014 kb on + strand, within ABID97_RS11180 at 2313.014 kb on + strand, within ABID97_RS11180 at 2313.097 kb on + strand, within ABID97_RS11180 at 2313.153 kb on - strand, within ABID97_RS11180 at 2313.153 kb on - strand, within ABID97_RS11180 at 2313.296 kb on + strand at 2313.296 kb on + strand at 2313.296 kb on + strand at 2313.297 kb on - strand at 2313.297 kb on - strand at 2313.418 kb on + strand at 2313.449 kb on - strand, within ABID97_RS11185 at 2313.814 kb on + strand, within ABID97_RS11185 at 2313.814 kb on + strand, within ABID97_RS11185 at 2314.264 kb on + strand at 2314.264 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 2,311,517 + -3.3 2,311,530 + -2.1 2,311,530 + -0.2 2,311,531 - -0.7 2,311,531 - +0.1 2,311,531 - +2.1 2,311,531 - -0.2 2,311,541 + -2.7 2,311,541 + -0.3 2,311,541 + -0.6 2,311,541 + +1.7 2,311,541 + +0.1 2,311,541 + +1.6 2,311,542 - -1.1 2,311,542 - -0.5 2,311,542 - +0.4 2,311,542 - +0.4 2,312,214 + -1.5 2,312,732 + ABID97_RS11180 0.41 -0.2 2,312,732 + ABID97_RS11180 0.41 +0.3 2,312,933 + ABID97_RS11180 0.61 -3.3 2,312,933 + ABID97_RS11180 0.61 +1.3 2,312,933 + ABID97_RS11180 0.61 +1.2 2,312,934 - ABID97_RS11180 0.61 +0.4 2,312,934 - ABID97_RS11180 0.61 -0.0 2,312,934 - ABID97_RS11180 0.61 +0.7 2,312,934 - ABID97_RS11180 0.61 +0.8 2,313,014 + ABID97_RS11180 0.69 -1.4 2,313,014 + ABID97_RS11180 0.69 -0.1 2,313,097 + ABID97_RS11180 0.77 +0.2 2,313,153 - ABID97_RS11180 0.83 -0.8 2,313,153 - ABID97_RS11180 0.83 +0.8 2,313,296 + +0.0 2,313,296 + -1.1 2,313,296 + -0.7 2,313,297 - +0.8 2,313,297 - +0.3 2,313,418 + +0.4 2,313,449 - ABID97_RS11185 0.13 +0.6 2,313,814 + ABID97_RS11185 0.48 +0.3 2,313,814 + ABID97_RS11185 0.48 +0.8 2,314,264 + +0.4 2,314,264 + -0.1
Or see this region's nucleotide sequence