Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS04280 and ABID97_RS04285 are separated by 104 nucleotides ABID97_RS04285 and ABID97_RS04290 are separated by 30 nucleotides ABID97_RS04290 and ABID97_RS04295 are separated by 134 nucleotides
ABID97_RS04280: ABID97_RS04280 - FAD-dependent oxidoreductase, at 879,167 to 880,534
_RS04280
ABID97_RS04285: ABID97_RS04285 - acyl-CoA thioesterase II, at 880,639 to 881,517
_RS04285
ABID97_RS04290: ABID97_RS04290 - glutathione S-transferase, at 881,548 to 882,156
_RS04290
ABID97_RS04295: ABID97_RS04295 - SDR family oxidoreductase, at 882,291 to 883,004
_RS04295
Position (kb) 880
881
882 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 879.968 kb on - strand, within ABID97_RS04280 at 880.052 kb on + strand, within ABID97_RS04280 at 880.157 kb on + strand, within ABID97_RS04280 at 880.158 kb on - strand, within ABID97_RS04280 at 880.289 kb on + strand, within ABID97_RS04280 at 880.289 kb on + strand, within ABID97_RS04280 at 880.290 kb on - strand, within ABID97_RS04280 at 880.290 kb on - strand, within ABID97_RS04280 at 880.290 kb on - strand, within ABID97_RS04280 at 880.591 kb on + strand at 880.592 kb on - strand at 880.847 kb on - strand, within ABID97_RS04285 at 880.847 kb on - strand, within ABID97_RS04285 at 880.847 kb on - strand, within ABID97_RS04285 at 880.847 kb on - strand, within ABID97_RS04285 at 880.883 kb on - strand, within ABID97_RS04285 at 880.883 kb on - strand, within ABID97_RS04285 at 881.022 kb on + strand, within ABID97_RS04285 at 881.257 kb on + strand, within ABID97_RS04285 at 881.395 kb on + strand, within ABID97_RS04285 at 881.395 kb on + strand, within ABID97_RS04285 at 881.395 kb on + strand, within ABID97_RS04285 at 881.396 kb on - strand, within ABID97_RS04285 at 881.396 kb on - strand, within ABID97_RS04285 at 881.396 kb on - strand, within ABID97_RS04285 at 881.527 kb on + strand at 881.765 kb on - strand, within ABID97_RS04290 at 881.882 kb on - strand, within ABID97_RS04290 at 882.090 kb on + strand at 882.139 kb on - strand at 882.139 kb on - strand at 882.139 kb on - strand at 882.215 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 879,968 - ABID97_RS04280 0.59 -0.8 880,052 + ABID97_RS04280 0.65 -0.7 880,157 + ABID97_RS04280 0.72 +0.5 880,158 - ABID97_RS04280 0.72 -0.0 880,289 + ABID97_RS04280 0.82 -0.6 880,289 + ABID97_RS04280 0.82 -1.3 880,290 - ABID97_RS04280 0.82 -2.5 880,290 - ABID97_RS04280 0.82 -2.9 880,290 - ABID97_RS04280 0.82 +0.7 880,591 + +0.1 880,592 - -1.2 880,847 - ABID97_RS04285 0.24 +0.2 880,847 - ABID97_RS04285 0.24 +0.4 880,847 - ABID97_RS04285 0.24 +0.7 880,847 - ABID97_RS04285 0.24 -0.3 880,883 - ABID97_RS04285 0.28 -2.6 880,883 - ABID97_RS04285 0.28 -0.1 881,022 + ABID97_RS04285 0.44 -1.2 881,257 + ABID97_RS04285 0.70 -1.9 881,395 + ABID97_RS04285 0.86 -3.0 881,395 + ABID97_RS04285 0.86 +0.3 881,395 + ABID97_RS04285 0.86 +0.2 881,396 - ABID97_RS04285 0.86 -0.8 881,396 - ABID97_RS04285 0.86 -1.4 881,396 - ABID97_RS04285 0.86 -0.1 881,527 + -2.8 881,765 - ABID97_RS04290 0.36 +0.1 881,882 - ABID97_RS04290 0.55 -1.9 882,090 + +2.0 882,139 - -0.5 882,139 - +0.4 882,139 - -3.4 882,215 + -0.4
Or see this region's nucleotide sequence