Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02540 and ABID97_RS02545 are separated by 0 nucleotides ABID97_RS02545 and ABID97_RS02550 are separated by 68 nucleotides ABID97_RS02550 and ABID97_RS02555 are separated by 103 nucleotides ABID97_RS02555 and ABID97_RS02560 are separated by 131 nucleotides
ABID97_RS02540: ABID97_RS02540 - phosphotransferase, at 520,108 to 521,245
_RS02540
ABID97_RS02545: ABID97_RS02545 - 16S rRNA (uracil(1498)-N(3))-methyltransferase, at 521,246 to 521,981
_RS02545
ABID97_RS02550: ABID97_RS02550 - M20/M25/M40 family metallo-hydrolase, at 522,050 to 523,414
_RS02550
ABID97_RS02555: ABID97_RS02555 - YidB family protein, at 523,518 to 523,970
_RS02555
ABID97_RS02560: ABID97_RS02560 - MFS transporter, at 524,102 to 525,277
_RS02560
Position (kb) 522
523
524 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 521.106 kb on - strand, within ABID97_RS02540 at 521.135 kb on + strand at 521.135 kb on + strand at 521.135 kb on + strand at 521.135 kb on + strand at 521.135 kb on + strand at 521.135 kb on + strand at 521.135 kb on + strand at 521.136 kb on - strand at 521.136 kb on - strand at 521.136 kb on - strand at 521.136 kb on - strand at 521.136 kb on - strand at 521.243 kb on + strand at 521.243 kb on + strand at 521.243 kb on + strand at 521.243 kb on + strand at 521.243 kb on + strand at 521.243 kb on + strand at 521.243 kb on + strand at 521.243 kb on + strand at 521.243 kb on + strand at 521.244 kb on - strand at 521.244 kb on - strand at 521.244 kb on - strand at 521.244 kb on - strand at 521.244 kb on - strand at 521.244 kb on - strand at 521.244 kb on - strand at 521.384 kb on + strand, within ABID97_RS02545 at 521.385 kb on - strand, within ABID97_RS02545 at 521.385 kb on - strand, within ABID97_RS02545 at 522.762 kb on - strand, within ABID97_RS02550 at 523.227 kb on - strand, within ABID97_RS02550 at 523.227 kb on - strand, within ABID97_RS02550 at 523.405 kb on + strand at 523.406 kb on - strand at 523.406 kb on - strand at 523.413 kb on - strand at 523.968 kb on + strand at 524.057 kb on + strand at 524.058 kb on - strand at 524.058 kb on - strand at 524.240 kb on + strand, within ABID97_RS02560 at 524.240 kb on + strand, within ABID97_RS02560 at 524.240 kb on + strand, within ABID97_RS02560 at 524.240 kb on + strand, within ABID97_RS02560 at 524.240 kb on + strand, within ABID97_RS02560 at 524.240 kb on + strand, within ABID97_RS02560 at 524.240 kb on + strand, within ABID97_RS02560 at 524.241 kb on - strand, within ABID97_RS02560 at 524.241 kb on - strand, within ABID97_RS02560
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 521,106 - ABID97_RS02540 0.88 +2.1 521,135 + -0.3 521,135 + +1.5 521,135 + -0.4 521,135 + -0.5 521,135 + +0.8 521,135 + -0.1 521,135 + +0.1 521,136 - +0.7 521,136 - -0.3 521,136 - +0.8 521,136 - +0.5 521,136 - -0.2 521,243 + -0.9 521,243 + -0.7 521,243 + -3.5 521,243 + +0.1 521,243 + +0.6 521,243 + +0.4 521,243 + +0.1 521,243 + +0.0 521,243 + -0.9 521,244 - -1.9 521,244 - +0.7 521,244 - +0.7 521,244 - -3.6 521,244 - -1.0 521,244 - +0.1 521,244 - +0.1 521,384 + ABID97_RS02545 0.19 +0.5 521,385 - ABID97_RS02545 0.19 +0.1 521,385 - ABID97_RS02545 0.19 -1.8 522,762 - ABID97_RS02550 0.52 +0.6 523,227 - ABID97_RS02550 0.86 +1.6 523,227 - ABID97_RS02550 0.86 +0.4 523,405 + -0.6 523,406 - +0.3 523,406 - +0.9 523,413 - -1.9 523,968 + +0.6 524,057 + -1.1 524,058 - -1.1 524,058 - +0.5 524,240 + ABID97_RS02560 0.12 +2.2 524,240 + ABID97_RS02560 0.12 +0.0 524,240 + ABID97_RS02560 0.12 +0.4 524,240 + ABID97_RS02560 0.12 -0.1 524,240 + ABID97_RS02560 0.12 +0.7 524,240 + ABID97_RS02560 0.12 -0.9 524,240 + ABID97_RS02560 0.12 +0.2 524,241 - ABID97_RS02560 0.12 -0.5 524,241 - ABID97_RS02560 0.12 +0.4
Or see this region's nucleotide sequence