Strain Fitness in Escherichia coli BW25113 around b4187

Experiment: Gly-DL-Asp (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-DL-Asp (N)
4,411,298	+	yjfC	b4186	0.21	-0.0
4,411,298	+	yjfC	b4186	0.21	-2.2
4,411,357	+	yjfC	b4186	0.26	+0.6
4,411,376	-	yjfC	b4186	0.28	-0.1
4,411,398	+	yjfC	b4186	0.30	+0.1
4,411,398	+	yjfC	b4186	0.30	+1.0
4,411,579	+	yjfC	b4186	0.45	-0.0
4,411,585	-	yjfC	b4186	0.46	-0.2
4,411,642	+	yjfC	b4186	0.51	+0.8
4,411,643	-	yjfC	b4186	0.51	-0.4
4,411,704	-	yjfC	b4186	0.56	-0.4
4,411,704	-	yjfC	b4186	0.56	+0.8
4,411,730	-	yjfC	b4186	0.58	+1.1
4,411,740	+	yjfC	b4186	0.59	-0.1
4,411,805	+	yjfC	b4186	0.65	+0.1
4,411,863	-	yjfC	b4186	0.70	+1.1
4,411,863	-	yjfC	b4186	0.70	+0.5
4,411,872	+	yjfC	b4186	0.71	-0.0
4,411,900	-	yjfC	b4186	0.73	+1.7
4,411,900	-	yjfC	b4186	0.73	+1.3
4,411,904	+	yjfC	b4186	0.73	+1.1
4,411,904	+	yjfC	b4186	0.73	+1.4
4,411,958	-	yjfC	b4186	0.78	-0.5
4,412,034	-	yjfC	b4186	0.84	+0.1
4,412,064	+	yjfC	b4186	0.87	-1.8
4,412,064	+	yjfC	b4186	0.87	-0.6
4,412,101	-				-0.3
4,412,101	-				+0.8
4,412,146	-				+0.7
4,412,246	-				-0.4
4,412,252	+				-0.3
4,412,270	-				+0.1
4,412,282	-				-0.0
4,412,286	+				+0.1
4,412,319	+				+0.1
4,412,338	-				-0.2
4,412,338	-				+0.1
4,412,360	-				-1.6
4,412,378	+				-0.4
4,412,449	-				+0.7
4,412,449	-				+0.5
4,412,564	-	aidB	b4187	0.16	+0.6
4,412,611	+	aidB	b4187	0.19	+0.6
4,412,611	+	aidB	b4187	0.19	-0.8
4,412,670	+	aidB	b4187	0.23	+0.1
4,412,670	+	aidB	b4187	0.23	+0.3
4,412,712	-	aidB	b4187	0.25	+0.5
4,412,793	-	aidB	b4187	0.30	+0.5
4,412,901	-	aidB	b4187	0.37	+0.6
4,412,908	-	aidB	b4187	0.38	+0.4
4,413,002	+	aidB	b4187	0.43	-0.0
4,413,002	+	aidB	b4187	0.43	-0.2
4,413,088	+	aidB	b4187	0.49	+1.3
4,413,088	-	aidB	b4187	0.49	+0.8
4,413,123	+	aidB	b4187	0.51	+0.5
4,413,240	-	aidB	b4187	0.58	+0.2
4,413,240	-	aidB	b4187	0.58	-0.2
4,413,318	-	aidB	b4187	0.63	-1.1
4,413,489	+	aidB	b4187	0.73	-0.9
4,413,521	+	aidB	b4187	0.75	-0.4
4,413,586	+	aidB	b4187	0.79	+1.2
4,413,690	-	aidB	b4187	0.86	+0.3
4,413,735	+	aidB	b4187	0.88	-0.8
4,413,735	+	aidB	b4187	0.88	-0.3
4,413,865	+				+0.7
4,413,918	+				+0.0
4,413,918	-				-0.1
4,414,039	+				-0.2
4,414,039	+				-0.5
4,414,049	-				-0.2
4,414,049	-				-0.7
4,414,051	+				+1.0
4,414,136	+	yjfN	b4188	0.35	+0.2
4,414,136	+	yjfN	b4188	0.35	-0.3
4,414,142	-	yjfN	b4188	0.37	-0.5
4,414,142	-	yjfN	b4188	0.37	-0.7
4,414,160	+	yjfN	b4188	0.43	+0.7
4,414,181	-	yjfN	b4188	0.51	+0.1
4,414,206	-	yjfN	b4188	0.60	-0.1
4,414,226	-	yjfN	b4188	0.67	+0.4
4,414,226	-	yjfN	b4188	0.67	-0.8
4,414,230	+	yjfN	b4188	0.69	-0.3
4,414,252	+	yjfN	b4188	0.77	-1.0
4,414,254	+	yjfN	b4188	0.78	+0.6
4,414,257	-	yjfN	b4188	0.79	+1.0
4,414,257	-	yjfN	b4188	0.79	+0.2
4,414,345	+				+0.9
4,414,355	+				-0.8
4,414,356	+				-0.3
4,414,368	+				-1.2
4,414,368	+				-0.5
4,414,374	-				+0.7
4,414,374	-				+0.4
4,414,377	-				+0.9
4,414,377	-				-0.9
4,414,392	+				+0.2
4,414,394	+				-0.9
4,414,394	+				-0.4
4,414,409	+				+0.1
4,414,409	+				+0.0
4,414,409	+				-0.3
4,414,410	-				-0.2
4,414,415	-				+0.2
4,414,422	-				-1.4
4,414,424	+				-0.2
4,414,424	+				-0.3
4,414,431	+				-0.6
4,414,431	+				-1.6
4,414,434	+				-0.4
4,414,434	+				+0.5
4,414,442	-				+0.5
4,414,448	+				+0.5
4,414,448	+				+1.0
4,414,456	-				+0.5
4,414,499	+	yjfO	b4189	0.11	+0.4
4,414,523	-	yjfO	b4189	0.18	+0.0
4,414,599	+	yjfO	b4189	0.41	-0.6
4,414,599	+	yjfO	b4189	0.41	-0.5
4,414,613	+	yjfO	b4189	0.45	+0.3
4,414,617	-	yjfO	b4189	0.46	-1.1
4,414,621	-	yjfO	b4189	0.48	+0.1
4,414,621	-	yjfO	b4189	0.48	-0.3
4,414,621	-	yjfO	b4189	0.48	+0.7
4,414,651	-	yjfO	b4189	0.57	+0.0
4,414,682	-	yjfO	b4189	0.66	+0.4
4,414,682	-	yjfO	b4189	0.66	-1.2
4,414,704	+	yjfO	b4189	0.73	+0.4
4,414,705	-	yjfO	b4189	0.73	+0.3
4,414,716	+	yjfO	b4189	0.76	+0.1
4,414,722	-	yjfO	b4189	0.78	-1.0
4,414,746	-	yjfO	b4189	0.85	-0.3
4,414,791	-				-0.7
4,414,791	-				-0.8
4,414,795	+				-0.3
4,414,800	-				+0.6
4,414,800	-				-0.0
4,414,825	-				+0.3
4,414,838	-				-0.2
4,414,838	-				+0.6
4,414,885	+				-0.2
4,414,899	+				+0.8
4,414,899	+				-0.8