Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_18320 and IAI46_18325 are separated by 8 nucleotides IAI46_18325 and IAI46_18330 are separated by 198 nucleotides
IAI46_18320: IAI46_18320 - (2,3-dihydroxybenzoyl)adenylate synthase, at 3,851,778 to 3,853,406
_18320
IAI46_18325: IAI46_18325 - isochorismate synthase, at 3,853,415 to 3,854,623
_18325
IAI46_18330: IAI46_18330 - Fe2+-enterobactin ABC transporter substrate-binding protein, at 3,854,822 to 3,855,781
_18330
Position (kb)
3853
3854
3855 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3852.600 kb on + strand, within IAI46_18320 at 3852.662 kb on - strand, within IAI46_18320 at 3852.778 kb on + strand, within IAI46_18320 at 3852.778 kb on + strand, within IAI46_18320 at 3852.779 kb on - strand, within IAI46_18320 at 3852.781 kb on + strand, within IAI46_18320 at 3852.781 kb on + strand, within IAI46_18320 at 3852.781 kb on + strand, within IAI46_18320 at 3852.782 kb on - strand, within IAI46_18320 at 3852.782 kb on - strand, within IAI46_18320 at 3852.785 kb on - strand, within IAI46_18320 at 3852.785 kb on - strand, within IAI46_18320 at 3852.995 kb on - strand, within IAI46_18320 at 3853.063 kb on + strand, within IAI46_18320 at 3853.092 kb on - strand, within IAI46_18320 at 3853.113 kb on + strand, within IAI46_18320 at 3853.114 kb on - strand, within IAI46_18320 at 3853.147 kb on + strand, within IAI46_18320 at 3853.147 kb on + strand, within IAI46_18320 at 3853.147 kb on + strand, within IAI46_18320 at 3853.197 kb on + strand, within IAI46_18320 at 3853.198 kb on - strand, within IAI46_18320 at 3853.198 kb on - strand, within IAI46_18320 at 3853.198 kb on - strand, within IAI46_18320 at 3853.244 kb on + strand at 3853.245 kb on - strand at 3853.245 kb on - strand at 3853.256 kb on - strand at 3853.417 kb on - strand at 3853.450 kb on + strand at 3853.451 kb on - strand at 3853.568 kb on + strand, within IAI46_18325 at 3853.765 kb on + strand, within IAI46_18325 at 3853.855 kb on + strand, within IAI46_18325 at 3853.855 kb on + strand, within IAI46_18325 at 3853.882 kb on - strand, within IAI46_18325 at 3853.882 kb on - strand, within IAI46_18325 at 3854.003 kb on + strand, within IAI46_18325 at 3854.086 kb on + strand, within IAI46_18325 at 3854.086 kb on + strand, within IAI46_18325 at 3854.245 kb on + strand, within IAI46_18325 at 3854.524 kb on + strand at 3854.610 kb on - strand at 3854.715 kb on - strand at 3854.715 kb on - strand at 3854.780 kb on - strand at 3854.825 kb on + strand at 3854.865 kb on + strand at 3855.109 kb on - strand, within IAI46_18330 at 3855.119 kb on + strand, within IAI46_18330 at 3855.213 kb on - strand, within IAI46_18330 at 3855.285 kb on + strand, within IAI46_18330 at 3855.286 kb on - strand, within IAI46_18330 at 3855.373 kb on + strand, within IAI46_18330 at 3855.373 kb on + strand, within IAI46_18330
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, anaerobic remove 3,852,600 + IAI46_18320 0.50 +0.8 3,852,662 - IAI46_18320 0.54 +0.4 3,852,778 + IAI46_18320 0.61 -1.7 3,852,778 + IAI46_18320 0.61 +3.0 3,852,779 - IAI46_18320 0.61 -0.0 3,852,781 + IAI46_18320 0.62 -1.2 3,852,781 + IAI46_18320 0.62 -0.3 3,852,781 + IAI46_18320 0.62 +0.8 3,852,782 - IAI46_18320 0.62 +0.0 3,852,782 - IAI46_18320 0.62 -0.1 3,852,785 - IAI46_18320 0.62 +0.3 3,852,785 - IAI46_18320 0.62 +0.7 3,852,995 - IAI46_18320 0.75 -0.2 3,853,063 + IAI46_18320 0.79 +0.3 3,853,092 - IAI46_18320 0.81 +0.5 3,853,113 + IAI46_18320 0.82 +0.1 3,853,114 - IAI46_18320 0.82 -0.0 3,853,147 + IAI46_18320 0.84 +1.5 3,853,147 + IAI46_18320 0.84 +0.2 3,853,147 + IAI46_18320 0.84 -0.3 3,853,197 + IAI46_18320 0.87 -0.2 3,853,198 - IAI46_18320 0.87 +1.5 3,853,198 - IAI46_18320 0.87 -1.1 3,853,198 - IAI46_18320 0.87 +0.5 3,853,244 + +1.2 3,853,245 - -0.1 3,853,245 - +0.1 3,853,256 - +1.0 3,853,417 - -0.4 3,853,450 + -0.2 3,853,451 - +0.1 3,853,568 + IAI46_18325 0.13 +1.2 3,853,765 + IAI46_18325 0.29 -0.1 3,853,855 + IAI46_18325 0.36 +0.1 3,853,855 + IAI46_18325 0.36 +1.1 3,853,882 - IAI46_18325 0.39 +0.3 3,853,882 - IAI46_18325 0.39 +2.0 3,854,003 + IAI46_18325 0.49 -1.5 3,854,086 + IAI46_18325 0.56 +0.3 3,854,086 + IAI46_18325 0.56 -0.2 3,854,245 + IAI46_18325 0.69 -0.0 3,854,524 + -0.8 3,854,610 - +0.2 3,854,715 - +0.1 3,854,715 - -0.1 3,854,780 - -0.0 3,854,825 + -0.8 3,854,865 + +0.6 3,855,109 - IAI46_18330 0.30 +0.1 3,855,119 + IAI46_18330 0.31 -0.8 3,855,213 - IAI46_18330 0.41 +0.1 3,855,285 + IAI46_18330 0.48 +0.5 3,855,286 - IAI46_18330 0.48 -1.3 3,855,373 + IAI46_18330 0.57 +1.2 3,855,373 + IAI46_18330 0.57 +0.5
Or see this region's nucleotide sequence