Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14740 and IAI46_14745 are separated by 154 nucleotides IAI46_14745 and IAI46_14750 are separated by 83 nucleotides IAI46_14750 and IAI46_14755 are separated by 70 nucleotides IAI46_14755 and IAI46_14760 are separated by 39 nucleotides IAI46_14760 and IAI46_14765 are separated by 88 nucleotides
IAI46_14740: IAI46_14740 - phosphotransferase, at 3,122,056 to 3,123,696
_14740
IAI46_14745: IAI46_14745 - lipoprotein, at 3,123,851 to 3,124,414
_14745
IAI46_14750: IAI46_14750 - hypothetical protein, at 3,124,498 to 3,124,857
_14750
IAI46_14755: IAI46_14755 - ASCH domain-containing protein, at 3,124,928 to 3,125,236
_14755
IAI46_14760: IAI46_14760 - YebG family protein, at 3,125,276 to 3,125,599
_14760
IAI46_14765: IAI46_14765 - ATP-dependent RNA helicase DbpA, at 3,125,688 to 3,127,070
_14765
Position (kb)
3124
3125 Strain fitness (log2 ratio)
-1
0
1 at 3123.550 kb on - strand at 3123.550 kb on - strand at 3123.721 kb on + strand at 3123.722 kb on - strand at 3123.743 kb on + strand at 3123.796 kb on + strand at 3123.835 kb on + strand at 3123.836 kb on - strand at 3123.926 kb on + strand, within IAI46_14745 at 3124.036 kb on - strand, within IAI46_14745 at 3124.163 kb on + strand, within IAI46_14745 at 3124.164 kb on - strand, within IAI46_14745 at 3124.214 kb on + strand, within IAI46_14745 at 3124.214 kb on + strand, within IAI46_14745 at 3124.333 kb on + strand, within IAI46_14745 at 3124.396 kb on + strand at 3124.479 kb on - strand at 3124.706 kb on + strand, within IAI46_14750 at 3124.804 kb on - strand, within IAI46_14750 at 3125.043 kb on - strand, within IAI46_14755 at 3125.124 kb on - strand, within IAI46_14755 at 3125.170 kb on + strand, within IAI46_14755 at 3125.171 kb on - strand, within IAI46_14755 at 3125.171 kb on - strand, within IAI46_14755 at 3125.269 kb on + strand at 3125.277 kb on + strand at 3125.278 kb on - strand at 3125.278 kb on - strand at 3125.581 kb on - strand at 3125.656 kb on - strand at 3125.656 kb on - strand at 3125.786 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, anaerobic remove 3,123,550 - +0.5 3,123,550 - -0.4 3,123,721 + -1.4 3,123,722 - +0.8 3,123,743 + -0.1 3,123,796 + +1.4 3,123,835 + +0.5 3,123,836 - -0.4 3,123,926 + IAI46_14745 0.13 +1.4 3,124,036 - IAI46_14745 0.33 +0.4 3,124,163 + IAI46_14745 0.55 +0.7 3,124,164 - IAI46_14745 0.55 +1.4 3,124,214 + IAI46_14745 0.64 -0.0 3,124,214 + IAI46_14745 0.64 +1.1 3,124,333 + IAI46_14745 0.85 -0.6 3,124,396 + +0.0 3,124,479 - -0.1 3,124,706 + IAI46_14750 0.58 -0.7 3,124,804 - IAI46_14750 0.85 -0.1 3,125,043 - IAI46_14755 0.37 -1.7 3,125,124 - IAI46_14755 0.63 +0.7 3,125,170 + IAI46_14755 0.78 +0.3 3,125,171 - IAI46_14755 0.79 -0.4 3,125,171 - IAI46_14755 0.79 -0.1 3,125,269 + +1.0 3,125,277 + +0.6 3,125,278 - +0.1 3,125,278 - +0.9 3,125,581 - +0.4 3,125,656 - -0.6 3,125,656 - -1.0 3,125,786 - -0.5
Or see this region's nucleotide sequence