Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14645 and IAI46_14650 are separated by 198 nucleotides IAI46_14650 and IAI46_14655 are separated by 241 nucleotides IAI46_14655 and IAI46_14660 are separated by 74 nucleotides IAI46_14660 and IAI46_14665 are separated by 102 nucleotides
IAI46_14645: IAI46_14645 - aspartate--tRNA ligase, at 3,103,161 to 3,104,951
_14645
IAI46_14650: IAI46_14650 - zinc ribbon domain-containing protein, at 3,105,150 to 3,105,338
_14650
IAI46_14655: IAI46_14655 - hydrolase, at 3,105,580 to 3,106,158
_14655
IAI46_14660: IAI46_14660 - DUF72 domain-containing protein, at 3,106,233 to 3,107,048
_14660
IAI46_14665: IAI46_14665 - MAPEG family protein, at 3,107,151 to 3,107,546
_14665
Position (kb)
3105
3106
3107 Strain fitness (log2 ratio)
-2
-1
0
1 at 3105.113 kb on - strand at 3105.146 kb on - strand at 3105.148 kb on - strand at 3105.243 kb on - strand, within IAI46_14650 at 3105.323 kb on - strand at 3105.323 kb on - strand at 3105.323 kb on - strand at 3105.339 kb on - strand at 3105.403 kb on - strand at 3105.431 kb on + strand at 3105.432 kb on - strand at 3105.432 kb on - strand at 3105.505 kb on + strand at 3105.505 kb on + strand at 3105.505 kb on + strand at 3105.506 kb on - strand at 3105.535 kb on - strand at 3105.615 kb on - strand at 3105.615 kb on - strand at 3105.618 kb on - strand at 3105.969 kb on + strand, within IAI46_14655 at 3105.981 kb on + strand, within IAI46_14655 at 3106.031 kb on + strand, within IAI46_14655 at 3106.032 kb on - strand, within IAI46_14655 at 3106.156 kb on + strand at 3106.163 kb on - strand at 3106.169 kb on + strand at 3106.226 kb on + strand at 3106.227 kb on - strand at 3106.227 kb on - strand at 3106.227 kb on - strand at 3106.236 kb on + strand at 3106.236 kb on + strand at 3106.236 kb on + strand at 3106.239 kb on - strand at 3106.302 kb on + strand at 3106.303 kb on - strand at 3106.311 kb on + strand at 3106.334 kb on + strand, within IAI46_14660 at 3106.454 kb on + strand, within IAI46_14660 at 3106.604 kb on + strand, within IAI46_14660 at 3106.605 kb on - strand, within IAI46_14660 at 3106.605 kb on - strand, within IAI46_14660 at 3106.605 kb on - strand, within IAI46_14660 at 3106.679 kb on - strand, within IAI46_14660 at 3106.853 kb on + strand, within IAI46_14660 at 3106.927 kb on + strand, within IAI46_14660 at 3106.928 kb on - strand, within IAI46_14660 at 3106.928 kb on - strand, within IAI46_14660 at 3106.928 kb on - strand, within IAI46_14660 at 3106.928 kb on - strand, within IAI46_14660 at 3106.931 kb on + strand, within IAI46_14660 at 3106.931 kb on + strand, within IAI46_14660 at 3106.932 kb on - strand, within IAI46_14660 at 3107.068 kb on - strand at 3107.109 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, anaerobic remove 3,105,113 - +1.2 3,105,146 - +0.2 3,105,148 - -0.7 3,105,243 - IAI46_14650 0.49 +0.3 3,105,323 - -1.1 3,105,323 - +1.1 3,105,323 - -0.0 3,105,339 - -1.9 3,105,403 - -0.6 3,105,431 + -1.5 3,105,432 - -1.3 3,105,432 - +0.2 3,105,505 + -0.2 3,105,505 + -0.1 3,105,505 + +1.2 3,105,506 - +1.1 3,105,535 - -1.0 3,105,615 - +0.3 3,105,615 - +0.9 3,105,618 - -0.8 3,105,969 + IAI46_14655 0.67 +0.0 3,105,981 + IAI46_14655 0.69 +1.3 3,106,031 + IAI46_14655 0.78 -0.2 3,106,032 - IAI46_14655 0.78 +0.1 3,106,156 + +0.4 3,106,163 - -0.3 3,106,169 + +0.2 3,106,226 + -2.3 3,106,227 - -2.0 3,106,227 - +1.2 3,106,227 - +0.0 3,106,236 + -0.5 3,106,236 + -0.7 3,106,236 + +0.6 3,106,239 - +0.8 3,106,302 + -1.1 3,106,303 - -0.4 3,106,311 + -1.6 3,106,334 + IAI46_14660 0.12 -0.1 3,106,454 + IAI46_14660 0.27 -0.4 3,106,604 + IAI46_14660 0.45 -2.2 3,106,605 - IAI46_14660 0.46 +0.2 3,106,605 - IAI46_14660 0.46 -0.4 3,106,605 - IAI46_14660 0.46 -0.3 3,106,679 - IAI46_14660 0.55 +0.5 3,106,853 + IAI46_14660 0.76 +0.5 3,106,927 + IAI46_14660 0.85 +0.4 3,106,928 - IAI46_14660 0.85 +0.8 3,106,928 - IAI46_14660 0.85 +0.5 3,106,928 - IAI46_14660 0.85 -1.2 3,106,928 - IAI46_14660 0.85 -0.0 3,106,931 + IAI46_14660 0.86 -0.4 3,106,931 + IAI46_14660 0.86 +0.5 3,106,932 - IAI46_14660 0.86 -0.5 3,107,068 - -0.2 3,107,109 - -0.2
Or see this region's nucleotide sequence