Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14580 and IAI46_14585 are separated by 188 nucleotides IAI46_14585 and IAI46_14590 are separated by 106 nucleotides
IAI46_14580: IAI46_14580 - MurR/RpiR family transcriptional regulator, at 3,090,780 to 3,091,652
_14580
IAI46_14585: IAI46_14585 - pyruvate kinase, at 3,091,841 to 3,093,283
_14585
IAI46_14590: IAI46_14590 - leucine-rich repeat domain-containing protein, at 3,093,390 to 3,094,274
_14590
Position (kb)
3091
3092
3093
3094 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3091.017 kb on + strand, within IAI46_14580 at 3091.017 kb on + strand, within IAI46_14580 at 3091.021 kb on + strand, within IAI46_14580 at 3091.059 kb on + strand, within IAI46_14580 at 3091.060 kb on - strand, within IAI46_14580 at 3091.101 kb on - strand, within IAI46_14580 at 3091.105 kb on + strand, within IAI46_14580 at 3091.106 kb on - strand, within IAI46_14580 at 3091.106 kb on - strand, within IAI46_14580 at 3091.150 kb on + strand, within IAI46_14580 at 3091.254 kb on + strand, within IAI46_14580 at 3091.254 kb on + strand, within IAI46_14580 at 3091.281 kb on - strand, within IAI46_14580 at 3091.312 kb on + strand, within IAI46_14580 at 3091.312 kb on + strand, within IAI46_14580 at 3091.312 kb on + strand, within IAI46_14580 at 3091.313 kb on - strand, within IAI46_14580 at 3091.313 kb on - strand, within IAI46_14580 at 3091.313 kb on - strand, within IAI46_14580 at 3091.322 kb on - strand, within IAI46_14580 at 3091.480 kb on - strand, within IAI46_14580 at 3091.480 kb on - strand, within IAI46_14580 at 3091.481 kb on + strand, within IAI46_14580 at 3091.510 kb on + strand, within IAI46_14580 at 3091.519 kb on + strand, within IAI46_14580 at 3091.541 kb on + strand, within IAI46_14580 at 3091.571 kb on + strand at 3091.755 kb on + strand at 3091.835 kb on + strand at 3091.838 kb on + strand at 3091.838 kb on + strand at 3091.838 kb on + strand at 3091.838 kb on + strand at 3091.838 kb on + strand at 3091.839 kb on - strand at 3091.839 kb on - strand at 3091.839 kb on - strand at 3091.839 kb on - strand at 3091.941 kb on + strand at 3092.038 kb on + strand, within IAI46_14585 at 3092.038 kb on + strand, within IAI46_14585 at 3092.039 kb on - strand, within IAI46_14585 at 3092.083 kb on + strand, within IAI46_14585 at 3092.083 kb on + strand, within IAI46_14585 at 3092.117 kb on - strand, within IAI46_14585 at 3092.182 kb on + strand, within IAI46_14585 at 3092.182 kb on + strand, within IAI46_14585 at 3092.217 kb on + strand, within IAI46_14585 at 3092.242 kb on - strand, within IAI46_14585 at 3092.456 kb on + strand, within IAI46_14585 at 3092.575 kb on - strand, within IAI46_14585 at 3092.907 kb on + strand, within IAI46_14585 at 3092.977 kb on + strand, within IAI46_14585 at 3093.133 kb on + strand, within IAI46_14585 at 3093.181 kb on + strand at 3093.266 kb on - strand at 3093.282 kb on - strand at 3093.471 kb on - strand at 3093.471 kb on - strand at 3093.478 kb on + strand at 3093.510 kb on + strand, within IAI46_14590 at 3093.614 kb on - strand, within IAI46_14590 at 3093.705 kb on + strand, within IAI46_14590 at 3093.709 kb on + strand, within IAI46_14590 at 3093.710 kb on - strand, within IAI46_14590 at 3093.712 kb on - strand, within IAI46_14590 at 3093.791 kb on + strand, within IAI46_14590 at 3093.792 kb on - strand, within IAI46_14590 at 3093.930 kb on - strand, within IAI46_14590 at 3094.085 kb on - strand, within IAI46_14590 at 3094.268 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, anaerobic remove 3,091,017 + IAI46_14580 0.27 -0.4 3,091,017 + IAI46_14580 0.27 +0.4 3,091,021 + IAI46_14580 0.28 +0.8 3,091,059 + IAI46_14580 0.32 -1.7 3,091,060 - IAI46_14580 0.32 +1.4 3,091,101 - IAI46_14580 0.37 -1.7 3,091,105 + IAI46_14580 0.37 -0.6 3,091,106 - IAI46_14580 0.37 -0.4 3,091,106 - IAI46_14580 0.37 -1.8 3,091,150 + IAI46_14580 0.42 -0.7 3,091,254 + IAI46_14580 0.54 +0.8 3,091,254 + IAI46_14580 0.54 +0.0 3,091,281 - IAI46_14580 0.57 -0.1 3,091,312 + IAI46_14580 0.61 -0.5 3,091,312 + IAI46_14580 0.61 -0.1 3,091,312 + IAI46_14580 0.61 +0.6 3,091,313 - IAI46_14580 0.61 +0.4 3,091,313 - IAI46_14580 0.61 +0.6 3,091,313 - IAI46_14580 0.61 -0.6 3,091,322 - IAI46_14580 0.62 +0.0 3,091,480 - IAI46_14580 0.80 -0.4 3,091,480 - IAI46_14580 0.80 +0.7 3,091,481 + IAI46_14580 0.80 -0.3 3,091,510 + IAI46_14580 0.84 -0.6 3,091,519 + IAI46_14580 0.85 +0.1 3,091,541 + IAI46_14580 0.87 +1.5 3,091,571 + +0.3 3,091,755 + +0.3 3,091,835 + +2.2 3,091,838 + -0.9 3,091,838 + +0.6 3,091,838 + -0.7 3,091,838 + -0.4 3,091,838 + -1.0 3,091,839 - +0.8 3,091,839 - -0.4 3,091,839 - +0.9 3,091,839 - +0.1 3,091,941 + -0.4 3,092,038 + IAI46_14585 0.14 +0.5 3,092,038 + IAI46_14585 0.14 +0.3 3,092,039 - IAI46_14585 0.14 -0.7 3,092,083 + IAI46_14585 0.17 -0.1 3,092,083 + IAI46_14585 0.17 -0.7 3,092,117 - IAI46_14585 0.19 -0.5 3,092,182 + IAI46_14585 0.24 +0.9 3,092,182 + IAI46_14585 0.24 -0.4 3,092,217 + IAI46_14585 0.26 +0.3 3,092,242 - IAI46_14585 0.28 -0.1 3,092,456 + IAI46_14585 0.43 +1.3 3,092,575 - IAI46_14585 0.51 +0.6 3,092,907 + IAI46_14585 0.74 +0.5 3,092,977 + IAI46_14585 0.79 -0.3 3,093,133 + IAI46_14585 0.90 -0.4 3,093,181 + -0.2 3,093,266 - -1.4 3,093,282 - -1.3 3,093,471 - -0.2 3,093,471 - +0.1 3,093,478 + +0.0 3,093,510 + IAI46_14590 0.14 +0.3 3,093,614 - IAI46_14590 0.25 +0.0 3,093,705 + IAI46_14590 0.36 +0.7 3,093,709 + IAI46_14590 0.36 +0.4 3,093,710 - IAI46_14590 0.36 +0.4 3,093,712 - IAI46_14590 0.36 +0.5 3,093,791 + IAI46_14590 0.45 -1.2 3,093,792 - IAI46_14590 0.45 -0.6 3,093,930 - IAI46_14590 0.61 +1.0 3,094,085 - IAI46_14590 0.79 +0.8 3,094,268 + -1.7
Or see this region's nucleotide sequence