Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14460 and IAI46_14465 are separated by 188 nucleotides IAI46_14465 and IAI46_14470 are separated by 92 nucleotides
IAI46_14460: IAI46_14460 - D-amino acid dehydrogenase, at 3,067,197 to 3,068,501
_14460
IAI46_14465: IAI46_14465 - hypothetical protein, at 3,068,690 to 3,068,947
_14465
IAI46_14470: IAI46_14470 - SpoVR family protein, at 3,069,040 to 3,070,575
_14470
Position (kb)
3068
3069 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3067.735 kb on + strand, within IAI46_14460 at 3067.843 kb on + strand, within IAI46_14460 at 3067.843 kb on + strand, within IAI46_14460 at 3067.843 kb on + strand, within IAI46_14460 at 3067.843 kb on + strand, within IAI46_14460 at 3067.844 kb on - strand, within IAI46_14460 at 3067.844 kb on - strand, within IAI46_14460 at 3068.114 kb on - strand, within IAI46_14460 at 3068.181 kb on - strand, within IAI46_14460 at 3068.181 kb on - strand, within IAI46_14460 at 3068.200 kb on + strand, within IAI46_14460 at 3068.200 kb on + strand, within IAI46_14460 at 3068.201 kb on - strand, within IAI46_14460 at 3068.450 kb on - strand at 3068.491 kb on - strand at 3068.615 kb on - strand at 3068.646 kb on + strand at 3068.646 kb on + strand at 3068.654 kb on + strand at 3068.657 kb on - strand at 3068.666 kb on + strand at 3068.667 kb on - strand at 3068.688 kb on + strand at 3068.689 kb on - strand at 3068.689 kb on - strand at 3068.689 kb on - strand at 3068.750 kb on - strand, within IAI46_14465 at 3068.851 kb on + strand, within IAI46_14465 at 3068.994 kb on + strand at 3069.025 kb on - strand at 3069.025 kb on - strand at 3069.045 kb on + strand at 3069.124 kb on + strand at 3069.172 kb on + strand at 3069.195 kb on + strand, within IAI46_14470 at 3069.220 kb on + strand, within IAI46_14470 at 3069.220 kb on + strand, within IAI46_14470 at 3069.244 kb on - strand, within IAI46_14470 at 3069.250 kb on - strand, within IAI46_14470 at 3069.295 kb on + strand, within IAI46_14470 at 3069.441 kb on + strand, within IAI46_14470 at 3069.488 kb on - strand, within IAI46_14470 at 3069.508 kb on + strand, within IAI46_14470 at 3069.603 kb on + strand, within IAI46_14470 at 3069.604 kb on - strand, within IAI46_14470 at 3069.664 kb on + strand, within IAI46_14470 at 3069.914 kb on - strand, within IAI46_14470
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, anaerobic remove 3,067,735 + IAI46_14460 0.41 +1.7 3,067,843 + IAI46_14460 0.50 +0.4 3,067,843 + IAI46_14460 0.50 +0.6 3,067,843 + IAI46_14460 0.50 -1.6 3,067,843 + IAI46_14460 0.50 +0.2 3,067,844 - IAI46_14460 0.50 +1.3 3,067,844 - IAI46_14460 0.50 +0.2 3,068,114 - IAI46_14460 0.70 +0.6 3,068,181 - IAI46_14460 0.75 +0.8 3,068,181 - IAI46_14460 0.75 -0.2 3,068,200 + IAI46_14460 0.77 -1.4 3,068,200 + IAI46_14460 0.77 +1.1 3,068,201 - IAI46_14460 0.77 +0.2 3,068,450 - -0.9 3,068,491 - -0.2 3,068,615 - +1.9 3,068,646 + +0.0 3,068,646 + -1.0 3,068,654 + -0.7 3,068,657 - +0.2 3,068,666 + +0.3 3,068,667 - +0.7 3,068,688 + +0.5 3,068,689 - +0.0 3,068,689 - +1.1 3,068,689 - +0.7 3,068,750 - IAI46_14465 0.23 +0.1 3,068,851 + IAI46_14465 0.62 +0.5 3,068,994 + +0.5 3,069,025 - +0.2 3,069,025 - +0.3 3,069,045 + -0.4 3,069,124 + +0.3 3,069,172 + +1.4 3,069,195 + IAI46_14470 0.10 -1.9 3,069,220 + IAI46_14470 0.12 +0.4 3,069,220 + IAI46_14470 0.12 -1.0 3,069,244 - IAI46_14470 0.13 +0.3 3,069,250 - IAI46_14470 0.14 +0.4 3,069,295 + IAI46_14470 0.17 +0.1 3,069,441 + IAI46_14470 0.26 +1.0 3,069,488 - IAI46_14470 0.29 -1.0 3,069,508 + IAI46_14470 0.30 -0.4 3,069,603 + IAI46_14470 0.37 +0.6 3,069,604 - IAI46_14470 0.37 -0.5 3,069,664 + IAI46_14470 0.41 -0.3 3,069,914 - IAI46_14470 0.57 +1.2
Or see this region's nucleotide sequence