Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13765 and IAI46_13770 are separated by 60 nucleotides IAI46_13770 and IAI46_13775 are separated by 756 nucleotides IAI46_13775 and IAI46_13780 overlap by 17 nucleotides IAI46_13780 and IAI46_13785 overlap by 4 nucleotides
IAI46_13765: IAI46_13765 - hypothetical protein, at 2,930,100 to 2,930,249
_13765
IAI46_13770: IAI46_13770 - hypothetical protein, at 2,930,310 to 2,930,465
_13770
IAI46_13775: IAI46_13775 - chromosome partitioning protein ParB, at 2,931,222 to 2,932,064
_13775
IAI46_13780: IAI46_13780 - hypothetical protein, at 2,932,048 to 2,932,482
_13780
IAI46_13785: IAI46_13785 - phosphoadenosine phosphosulfate reductase family protein, at 2,932,479 to 2,933,396
_13785
Position (kb)
2931
2932
2933 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2930.294 kb on + strand at 2930.510 kb on + strand at 2930.604 kb on + strand at 2930.604 kb on + strand at 2930.649 kb on - strand at 2930.650 kb on + strand at 2930.651 kb on - strand at 2930.760 kb on + strand at 2930.761 kb on - strand at 2930.846 kb on - strand at 2930.918 kb on + strand at 2930.918 kb on + strand at 2930.919 kb on - strand at 2930.919 kb on - strand at 2930.965 kb on - strand at 2931.010 kb on + strand at 2931.030 kb on + strand at 2931.105 kb on - strand at 2931.105 kb on - strand at 2931.105 kb on - strand at 2931.109 kb on - strand at 2931.109 kb on - strand at 2931.216 kb on + strand at 2931.236 kb on + strand at 2931.236 kb on + strand at 2931.288 kb on - strand at 2931.288 kb on - strand at 2931.415 kb on + strand, within IAI46_13775 at 2931.476 kb on + strand, within IAI46_13775 at 2931.505 kb on + strand, within IAI46_13775 at 2931.544 kb on + strand, within IAI46_13775 at 2931.545 kb on - strand, within IAI46_13775 at 2931.572 kb on + strand, within IAI46_13775 at 2931.573 kb on - strand, within IAI46_13775 at 2931.684 kb on - strand, within IAI46_13775 at 2931.740 kb on + strand, within IAI46_13775 at 2931.772 kb on + strand, within IAI46_13775 at 2931.872 kb on + strand, within IAI46_13775 at 2931.910 kb on + strand, within IAI46_13775 at 2931.994 kb on + strand at 2931.994 kb on + strand at 2932.014 kb on + strand at 2932.103 kb on - strand, within IAI46_13780 at 2932.253 kb on + strand, within IAI46_13780 at 2932.718 kb on + strand, within IAI46_13785 at 2932.718 kb on + strand, within IAI46_13785 at 2932.718 kb on + strand, within IAI46_13785 at 2932.718 kb on + strand, within IAI46_13785 at 2932.718 kb on + strand, within IAI46_13785 at 2932.718 kb on + strand, within IAI46_13785 at 2932.854 kb on + strand, within IAI46_13785
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, anaerobic remove 2,930,294 + -0.8 2,930,510 + -0.5 2,930,604 + +1.4 2,930,604 + +1.1 2,930,649 - -0.0 2,930,650 + -0.1 2,930,651 - +0.6 2,930,760 + +0.3 2,930,761 - -0.0 2,930,846 - +0.4 2,930,918 + +0.5 2,930,918 + +0.2 2,930,919 - +0.6 2,930,919 - +0.3 2,930,965 - +0.4 2,931,010 + +0.3 2,931,030 + -0.7 2,931,105 - -0.5 2,931,105 - -2.8 2,931,105 - -0.0 2,931,109 - -0.4 2,931,109 - -1.5 2,931,216 + +1.5 2,931,236 + -0.0 2,931,236 + -0.9 2,931,288 - -0.0 2,931,288 - +0.1 2,931,415 + IAI46_13775 0.23 -0.3 2,931,476 + IAI46_13775 0.30 -0.0 2,931,505 + IAI46_13775 0.34 +1.0 2,931,544 + IAI46_13775 0.38 +0.4 2,931,545 - IAI46_13775 0.38 +1.0 2,931,572 + IAI46_13775 0.42 -0.6 2,931,573 - IAI46_13775 0.42 +1.0 2,931,684 - IAI46_13775 0.55 -0.0 2,931,740 + IAI46_13775 0.61 +0.5 2,931,772 + IAI46_13775 0.65 +0.5 2,931,872 + IAI46_13775 0.77 -0.8 2,931,910 + IAI46_13775 0.82 -0.8 2,931,994 + -1.5 2,931,994 + +0.3 2,932,014 + +0.1 2,932,103 - IAI46_13780 0.13 +0.8 2,932,253 + IAI46_13780 0.47 +0.3 2,932,718 + IAI46_13785 0.26 -0.4 2,932,718 + IAI46_13785 0.26 -0.4 2,932,718 + IAI46_13785 0.26 -0.5 2,932,718 + IAI46_13785 0.26 -0.0 2,932,718 + IAI46_13785 0.26 -0.1 2,932,718 + IAI46_13785 0.26 +0.5 2,932,854 + IAI46_13785 0.41 -1.2
Or see this region's nucleotide sequence