Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11640 and IAI46_11645 are separated by 141 nucleotides IAI46_11645 and IAI46_11650 are separated by 525 nucleotides
IAI46_11640: IAI46_11640 - YdgA family protein, at 2,456,020 to 2,457,543
_11640
IAI46_11645: IAI46_11645 - mannose-6-phosphate isomerase, at 2,457,685 to 2,458,863
_11645
IAI46_11650: IAI46_11650 - hypothetical protein, at 2,459,389 to 2,459,721
_11650
Position (kb)
2457
2458
2459 Strain fitness (log2 ratio)
-2
-1
0
1 at 2456.811 kb on + strand, within IAI46_11640 at 2456.888 kb on - strand, within IAI46_11640 at 2456.888 kb on - strand, within IAI46_11640 at 2457.686 kb on + strand at 2457.780 kb on + strand at 2457.781 kb on - strand at 2457.805 kb on - strand, within IAI46_11645 at 2458.456 kb on + strand, within IAI46_11645 at 2458.457 kb on - strand, within IAI46_11645 at 2458.488 kb on - strand, within IAI46_11645 at 2458.491 kb on + strand, within IAI46_11645 at 2458.680 kb on + strand, within IAI46_11645 at 2458.797 kb on - strand at 2458.833 kb on - strand at 2458.870 kb on - strand at 2459.007 kb on + strand at 2459.008 kb on - strand at 2459.010 kb on - strand at 2459.015 kb on - strand at 2459.015 kb on - strand at 2459.015 kb on - strand at 2459.050 kb on - strand at 2459.052 kb on - strand at 2459.059 kb on + strand at 2459.084 kb on - strand at 2459.111 kb on - strand at 2459.275 kb on - strand at 2459.335 kb on + strand at 2459.335 kb on + strand at 2459.336 kb on - strand at 2459.468 kb on - strand, within IAI46_11650 at 2459.507 kb on + strand, within IAI46_11650 at 2459.507 kb on + strand, within IAI46_11650 at 2459.574 kb on + strand, within IAI46_11650 at 2459.694 kb on + strand at 2459.703 kb on + strand at 2459.719 kb on + strand at 2459.741 kb on + strand at 2459.741 kb on + strand at 2459.837 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, anaerobic remove 2,456,811 + IAI46_11640 0.52 -0.3 2,456,888 - IAI46_11640 0.57 +0.8 2,456,888 - IAI46_11640 0.57 -0.5 2,457,686 + -0.1 2,457,780 + -2.0 2,457,781 - +0.6 2,457,805 - IAI46_11645 0.10 +0.8 2,458,456 + IAI46_11645 0.65 +0.6 2,458,457 - IAI46_11645 0.65 +0.6 2,458,488 - IAI46_11645 0.68 -0.5 2,458,491 + IAI46_11645 0.68 +0.7 2,458,680 + IAI46_11645 0.84 -1.6 2,458,797 - +0.4 2,458,833 - +0.4 2,458,870 - +0.7 2,459,007 + +0.7 2,459,008 - -0.1 2,459,010 - -0.3 2,459,015 - +0.2 2,459,015 - +0.2 2,459,015 - +0.3 2,459,050 - +1.2 2,459,052 - -0.6 2,459,059 + -0.9 2,459,084 - +0.1 2,459,111 - -0.1 2,459,275 - -0.5 2,459,335 + -0.0 2,459,335 + -0.0 2,459,336 - +0.3 2,459,468 - IAI46_11650 0.24 +0.2 2,459,507 + IAI46_11650 0.35 -0.2 2,459,507 + IAI46_11650 0.35 +0.8 2,459,574 + IAI46_11650 0.56 +0.7 2,459,694 + +0.1 2,459,703 + +0.0 2,459,719 + -0.2 2,459,741 + -2.1 2,459,741 + +0.7 2,459,837 + +0.8
Or see this region's nucleotide sequence