Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09810 and IAI46_09815 overlap by 11 nucleotides IAI46_09815 and IAI46_09820 overlap by 1 nucleotides IAI46_09820 and IAI46_09825 are separated by 14 nucleotides
IAI46_09810: IAI46_09810 - endolytic transglycosylase MltG, at 2,077,146 to 2,078,171
_09810
IAI46_09815: IAI46_09815 - dTMP kinase, at 2,078,161 to 2,078,796
_09815
IAI46_09820: IAI46_09820 - DNA polymerase III subunit delta', at 2,078,796 to 2,079,803
_09820
IAI46_09825: IAI46_09825 - metal-dependent hydrolase, at 2,079,818 to 2,080,594
_09825
Position (kb)
2078
2079
2080 Strain fitness (log2 ratio)
-1
0
1
2 at 2077.873 kb on + strand, within IAI46_09810 at 2077.914 kb on + strand, within IAI46_09810 at 2077.914 kb on + strand, within IAI46_09810 at 2077.914 kb on + strand, within IAI46_09810 at 2077.914 kb on + strand, within IAI46_09810 at 2077.914 kb on + strand, within IAI46_09810 at 2077.914 kb on + strand, within IAI46_09810 at 2077.914 kb on + strand, within IAI46_09810 at 2077.968 kb on + strand, within IAI46_09810 at 2077.968 kb on + strand, within IAI46_09810 at 2077.968 kb on + strand, within IAI46_09810 at 2078.117 kb on + strand at 2079.814 kb on + strand at 2079.814 kb on + strand at 2079.815 kb on - strand at 2079.825 kb on + strand at 2079.828 kb on + strand at 2079.829 kb on - strand at 2080.047 kb on - strand, within IAI46_09825 at 2080.113 kb on - strand, within IAI46_09825 at 2080.335 kb on - strand, within IAI46_09825 at 2080.335 kb on - strand, within IAI46_09825 at 2080.485 kb on - strand, within IAI46_09825 at 2080.505 kb on + strand, within IAI46_09825 at 2080.505 kb on + strand, within IAI46_09825 at 2080.575 kb on + strand at 2080.575 kb on + strand at 2080.576 kb on - strand at 2080.609 kb on + strand at 2080.610 kb on - strand at 2080.610 kb on - strand at 2080.617 kb on + strand at 2080.618 kb on - strand at 2080.618 kb on - strand at 2080.618 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, anaerobic remove 2,077,873 + IAI46_09810 0.71 +0.2 2,077,914 + IAI46_09810 0.75 -0.1 2,077,914 + IAI46_09810 0.75 -0.5 2,077,914 + IAI46_09810 0.75 +1.6 2,077,914 + IAI46_09810 0.75 +0.5 2,077,914 + IAI46_09810 0.75 -0.5 2,077,914 + IAI46_09810 0.75 +0.1 2,077,914 + IAI46_09810 0.75 -0.2 2,077,968 + IAI46_09810 0.80 +1.9 2,077,968 + IAI46_09810 0.80 +0.4 2,077,968 + IAI46_09810 0.80 -0.7 2,078,117 + +0.5 2,079,814 + +0.4 2,079,814 + -1.7 2,079,815 - -0.6 2,079,825 + +0.1 2,079,828 + -0.7 2,079,829 - +0.3 2,080,047 - IAI46_09825 0.29 +0.5 2,080,113 - IAI46_09825 0.38 -0.0 2,080,335 - IAI46_09825 0.67 -1.0 2,080,335 - IAI46_09825 0.67 +0.1 2,080,485 - IAI46_09825 0.86 +1.5 2,080,505 + IAI46_09825 0.88 -0.3 2,080,505 + IAI46_09825 0.88 -0.2 2,080,575 + +0.1 2,080,575 + +0.7 2,080,576 - -0.5 2,080,609 + -0.1 2,080,610 - +0.5 2,080,610 - -0.5 2,080,617 + -0.5 2,080,618 - -0.7 2,080,618 - +1.6 2,080,618 - +0.2
Or see this region's nucleotide sequence