Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09760 and IAI46_09765 are separated by 141 nucleotides IAI46_09765 and IAI46_09770 are separated by 16 nucleotides IAI46_09770 and IAI46_09775 are separated by 11 nucleotides IAI46_09775 and IAI46_09780 are separated by 6 nucleotides IAI46_09780 and IAI46_09785 are separated by 16 nucleotides
IAI46_09760: IAI46_09760 - septum formation inhibitor Maf, at 2,069,322 to 2,069,903
_09760
IAI46_09765: IAI46_09765 - 23S rRNA accumulation protein YceD, at 2,070,045 to 2,070,566
_09765
IAI46_09770: IAI46_09770 - 50S ribosomal protein L32, at 2,070,583 to 2,070,750
_09770
IAI46_09775: IAI46_09775 - phosphate acyltransferase PlsX, at 2,070,762 to 2,071,796
_09775
IAI46_09780: IAI46_09780 - ketoacyl-ACP synthase III, at 2,071,803 to 2,072,756
_09780
IAI46_09785: IAI46_09785 - ACP S-malonyltransferase, at 2,072,773 to 2,073,702
_09785
Position (kb)
2070
2071
2072 Strain fitness (log2 ratio)
-2
-1
0
1 at 2069.831 kb on + strand, within IAI46_09760 at 2069.893 kb on - strand at 2069.928 kb on - strand at 2069.972 kb on + strand at 2069.973 kb on - strand at 2070.014 kb on + strand at 2070.030 kb on + strand at 2070.030 kb on + strand at 2070.082 kb on + strand at 2070.306 kb on + strand, within IAI46_09765 at 2070.568 kb on + strand at 2070.575 kb on + strand at 2070.772 kb on + strand at 2070.851 kb on + strand at 2070.904 kb on + strand, within IAI46_09775 at 2070.904 kb on + strand, within IAI46_09775 at 2070.905 kb on - strand, within IAI46_09775 at 2071.080 kb on - strand, within IAI46_09775 at 2071.182 kb on - strand, within IAI46_09775 at 2071.343 kb on + strand, within IAI46_09775 at 2071.343 kb on + strand, within IAI46_09775 at 2071.392 kb on + strand, within IAI46_09775 at 2071.393 kb on - strand, within IAI46_09775 at 2071.393 kb on - strand, within IAI46_09775 at 2071.393 kb on - strand, within IAI46_09775 at 2071.498 kb on + strand, within IAI46_09775 at 2071.498 kb on + strand, within IAI46_09775 at 2071.498 kb on + strand, within IAI46_09775 at 2071.505 kb on - strand, within IAI46_09775 at 2071.594 kb on + strand, within IAI46_09775 at 2071.626 kb on + strand, within IAI46_09775 at 2071.628 kb on + strand, within IAI46_09775 at 2071.780 kb on + strand at 2071.780 kb on + strand at 2071.784 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, anaerobic remove 2,069,831 + IAI46_09760 0.87 +0.2 2,069,893 - -0.0 2,069,928 - +0.1 2,069,972 + -0.2 2,069,973 - -1.9 2,070,014 + +0.3 2,070,030 + -0.4 2,070,030 + -1.4 2,070,082 + -0.4 2,070,306 + IAI46_09765 0.50 -0.9 2,070,568 + -1.4 2,070,575 + -0.4 2,070,772 + -0.4 2,070,851 + -0.0 2,070,904 + IAI46_09775 0.14 -0.2 2,070,904 + IAI46_09775 0.14 -0.2 2,070,905 - IAI46_09775 0.14 -0.4 2,071,080 - IAI46_09775 0.31 +1.0 2,071,182 - IAI46_09775 0.41 +0.2 2,071,343 + IAI46_09775 0.56 -0.0 2,071,343 + IAI46_09775 0.56 +0.6 2,071,392 + IAI46_09775 0.61 +0.6 2,071,393 - IAI46_09775 0.61 +0.4 2,071,393 - IAI46_09775 0.61 +0.3 2,071,393 - IAI46_09775 0.61 +0.6 2,071,498 + IAI46_09775 0.71 +0.1 2,071,498 + IAI46_09775 0.71 -0.4 2,071,498 + IAI46_09775 0.71 +0.1 2,071,505 - IAI46_09775 0.72 -0.5 2,071,594 + IAI46_09775 0.80 +0.4 2,071,626 + IAI46_09775 0.83 +1.6 2,071,628 + IAI46_09775 0.84 -0.4 2,071,780 + +1.3 2,071,780 + -0.4 2,071,784 + +0.2
Or see this region's nucleotide sequence