Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09610 and IAI46_09615 are separated by 162 nucleotides IAI46_09615 and IAI46_09620 are separated by 1 nucleotides IAI46_09620 and IAI46_09625 are separated by 62 nucleotides IAI46_09625 and IAI46_09630 are separated by 206 nucleotides
IAI46_09610: IAI46_09610 - glucans biosynthesis glucosyltransferase MdoH, at 2,039,475 to 2,042,036
_09610
IAI46_09615: IAI46_09615 - YceK/YidQ family lipoprotein, at 2,042,199 to 2,042,444
_09615
IAI46_09620: IAI46_09620 - N-acetyltransferase, at 2,042,446 to 2,042,994
_09620
IAI46_09625: IAI46_09625 - secY/secA suppressor protein, at 2,043,057 to 2,043,434
_09625
IAI46_09630: IAI46_09630 - 2-isopropylmalate synthase, at 2,043,641 to 2,045,311
_09630
Position (kb)
2042
2043 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2041.621 kb on + strand, within IAI46_09610 at 2041.622 kb on - strand, within IAI46_09610 at 2041.625 kb on + strand, within IAI46_09610 at 2041.669 kb on - strand, within IAI46_09610 at 2041.669 kb on - strand, within IAI46_09610 at 2041.704 kb on + strand, within IAI46_09610 at 2041.705 kb on - strand, within IAI46_09610 at 2041.746 kb on - strand, within IAI46_09610 at 2041.832 kb on + strand at 2041.833 kb on - strand at 2041.986 kb on + strand at 2042.072 kb on - strand at 2042.271 kb on - strand, within IAI46_09615 at 2042.273 kb on + strand, within IAI46_09615 at 2042.360 kb on + strand, within IAI46_09615 at 2042.360 kb on + strand, within IAI46_09615 at 2042.361 kb on - strand, within IAI46_09615 at 2042.395 kb on + strand, within IAI46_09615 at 2042.395 kb on + strand, within IAI46_09615 at 2042.396 kb on - strand, within IAI46_09615 at 2042.396 kb on - strand, within IAI46_09615 at 2042.399 kb on + strand, within IAI46_09615 at 2042.405 kb on + strand, within IAI46_09615 at 2042.406 kb on - strand, within IAI46_09615 at 2042.436 kb on + strand at 2042.442 kb on + strand at 2042.443 kb on - strand at 2042.447 kb on + strand at 2042.447 kb on + strand at 2042.465 kb on - strand at 2042.530 kb on + strand, within IAI46_09620 at 2042.530 kb on + strand, within IAI46_09620 at 2042.531 kb on - strand, within IAI46_09620 at 2042.557 kb on - strand, within IAI46_09620 at 2042.621 kb on + strand, within IAI46_09620 at 2042.715 kb on + strand, within IAI46_09620 at 2042.715 kb on + strand, within IAI46_09620 at 2042.850 kb on + strand, within IAI46_09620 at 2042.889 kb on + strand, within IAI46_09620 at 2042.890 kb on - strand, within IAI46_09620 at 2042.890 kb on - strand, within IAI46_09620 at 2043.313 kb on + strand, within IAI46_09625 at 2043.424 kb on + strand at 2043.424 kb on + strand at 2043.425 kb on - strand at 2043.425 kb on - strand at 2043.453 kb on + strand at 2043.505 kb on + strand at 2043.506 kb on - strand at 2043.506 kb on - strand at 2043.605 kb on + strand at 2043.784 kb on + strand at 2043.784 kb on + strand at 2043.784 kb on + strand at 2043.813 kb on - strand, within IAI46_09630 at 2043.935 kb on - strand, within IAI46_09630
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, anaerobic remove 2,041,621 + IAI46_09610 0.84 -1.4 2,041,622 - IAI46_09610 0.84 +0.1 2,041,625 + IAI46_09610 0.84 +0.3 2,041,669 - IAI46_09610 0.86 -0.4 2,041,669 - IAI46_09610 0.86 +0.1 2,041,704 + IAI46_09610 0.87 -0.9 2,041,705 - IAI46_09610 0.87 -1.5 2,041,746 - IAI46_09610 0.89 +0.8 2,041,832 + -0.1 2,041,833 - -0.9 2,041,986 + +0.2 2,042,072 - +1.1 2,042,271 - IAI46_09615 0.29 -0.5 2,042,273 + IAI46_09615 0.30 +2.2 2,042,360 + IAI46_09615 0.65 -2.1 2,042,360 + IAI46_09615 0.65 +0.3 2,042,361 - IAI46_09615 0.66 +0.5 2,042,395 + IAI46_09615 0.80 +0.7 2,042,395 + IAI46_09615 0.80 +0.3 2,042,396 - IAI46_09615 0.80 +1.3 2,042,396 - IAI46_09615 0.80 +0.4 2,042,399 + IAI46_09615 0.81 +0.7 2,042,405 + IAI46_09615 0.84 +0.3 2,042,406 - IAI46_09615 0.84 -0.4 2,042,436 + +0.1 2,042,442 + +0.8 2,042,443 - -0.4 2,042,447 + -0.1 2,042,447 + -1.5 2,042,465 - -0.6 2,042,530 + IAI46_09620 0.15 -0.8 2,042,530 + IAI46_09620 0.15 +0.1 2,042,531 - IAI46_09620 0.15 +0.8 2,042,557 - IAI46_09620 0.20 +0.6 2,042,621 + IAI46_09620 0.32 +1.1 2,042,715 + IAI46_09620 0.49 -0.8 2,042,715 + IAI46_09620 0.49 -0.1 2,042,850 + IAI46_09620 0.74 -0.5 2,042,889 + IAI46_09620 0.81 +0.6 2,042,890 - IAI46_09620 0.81 -0.2 2,042,890 - IAI46_09620 0.81 +1.5 2,043,313 + IAI46_09625 0.68 -0.8 2,043,424 + -0.1 2,043,424 + +0.2 2,043,425 - +0.3 2,043,425 - +0.9 2,043,453 + -0.5 2,043,505 + -1.2 2,043,506 - +1.1 2,043,506 - -0.6 2,043,605 + -1.8 2,043,784 + +1.0 2,043,784 + -0.7 2,043,784 + +1.3 2,043,813 - IAI46_09630 0.10 +0.4 2,043,935 - IAI46_09630 0.18 +0.5
Or see this region's nucleotide sequence