Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03445 and IAI46_03450 overlap by 11 nucleotides IAI46_03450 and IAI46_03455 are separated by 1 nucleotides IAI46_03455 and IAI46_03460 overlap by 4 nucleotides
IAI46_03445: IAI46_03445 - UDP-N-acetylmuramate--L-alanine ligase, at 746,912 to 748,390
_03445
IAI46_03450: IAI46_03450 - D-alanine--D-alanine ligase, at 748,380 to 749,300
_03450
IAI46_03455: IAI46_03455 - cell division protein FtsQ, at 749,302 to 750,153
_03455
IAI46_03460: IAI46_03460 - cell division protein FtsA, at 750,150 to 751,406
_03460
Position (kb) 748
749
750 Strain fitness (log2 ratio) -1
0
1 at 748.399 kb on + strand at 748.564 kb on + strand, within IAI46_03450 at 748.564 kb on + strand, within IAI46_03450 at 748.564 kb on + strand, within IAI46_03450 at 748.626 kb on + strand, within IAI46_03450 at 748.628 kb on + strand, within IAI46_03450 at 748.628 kb on + strand, within IAI46_03450 at 748.719 kb on + strand, within IAI46_03450 at 748.719 kb on + strand, within IAI46_03450 at 748.743 kb on + strand, within IAI46_03450 at 748.780 kb on + strand, within IAI46_03450 at 748.780 kb on + strand, within IAI46_03450 at 748.838 kb on + strand, within IAI46_03450 at 748.941 kb on + strand, within IAI46_03450 at 748.969 kb on + strand, within IAI46_03450 at 749.025 kb on + strand, within IAI46_03450 at 749.046 kb on + strand, within IAI46_03450 at 749.046 kb on + strand, within IAI46_03450 at 749.301 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, anaerobic remove 748,399 + -0.6 748,564 + IAI46_03450 0.20 +0.3 748,564 + IAI46_03450 0.20 +0.1 748,564 + IAI46_03450 0.20 +0.7 748,626 + IAI46_03450 0.27 -0.5 748,628 + IAI46_03450 0.27 +0.3 748,628 + IAI46_03450 0.27 -0.0 748,719 + IAI46_03450 0.37 -0.2 748,719 + IAI46_03450 0.37 -0.2 748,743 + IAI46_03450 0.39 -0.4 748,780 + IAI46_03450 0.43 -0.4 748,780 + IAI46_03450 0.43 +0.5 748,838 + IAI46_03450 0.50 -0.5 748,941 + IAI46_03450 0.61 +0.2 748,969 + IAI46_03450 0.64 +1.0 749,025 + IAI46_03450 0.70 +0.1 749,046 + IAI46_03450 0.72 +0.6 749,046 + IAI46_03450 0.72 +0.5 749,301 + +0.9
Or see this region's nucleotide sequence