Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03205 and IAI46_03210 are separated by 43 nucleotides IAI46_03210 and IAI46_03215 are separated by 129 nucleotides IAI46_03215 and IAI46_03220 overlap by 4 nucleotides
IAI46_03205: IAI46_03205 - glutathione-regulated potassium-efflux system protein KefC, at 688,989 to 690,842
_03205
IAI46_03210: IAI46_03210 - LysE family translocator, at 690,886 to 691,500
_03210
IAI46_03215: IAI46_03215 - threonine/serine exporter ThrE family protein, at 691,630 to 692,430
_03215
IAI46_03220: IAI46_03220 - threonine/serine exporter, at 692,427 to 692,891
_03220
Position (kb) 690
691
692 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 689.900 kb on + strand, within IAI46_03205 at 689.901 kb on - strand, within IAI46_03205 at 690.043 kb on + strand, within IAI46_03205 at 690.229 kb on + strand, within IAI46_03205 at 690.241 kb on + strand, within IAI46_03205 at 690.242 kb on - strand, within IAI46_03205 at 690.245 kb on - strand, within IAI46_03205 at 690.259 kb on + strand, within IAI46_03205 at 690.259 kb on + strand, within IAI46_03205 at 690.260 kb on - strand, within IAI46_03205 at 690.260 kb on - strand, within IAI46_03205 at 690.263 kb on + strand, within IAI46_03205 at 690.263 kb on + strand, within IAI46_03205 at 690.263 kb on + strand, within IAI46_03205 at 690.263 kb on + strand, within IAI46_03205 at 690.264 kb on - strand, within IAI46_03205 at 690.264 kb on - strand, within IAI46_03205 at 690.264 kb on - strand, within IAI46_03205 at 690.264 kb on - strand, within IAI46_03205 at 690.293 kb on + strand, within IAI46_03205 at 690.331 kb on - strand, within IAI46_03205 at 690.331 kb on - strand, within IAI46_03205 at 690.331 kb on - strand, within IAI46_03205 at 690.518 kb on - strand, within IAI46_03205 at 690.626 kb on + strand, within IAI46_03205 at 690.627 kb on - strand, within IAI46_03205 at 690.639 kb on + strand, within IAI46_03205 at 690.640 kb on - strand, within IAI46_03205 at 690.640 kb on - strand, within IAI46_03205 at 690.641 kb on + strand, within IAI46_03205 at 690.642 kb on - strand, within IAI46_03205 at 690.672 kb on - strand at 690.675 kb on + strand at 690.840 kb on + strand at 690.887 kb on + strand at 690.888 kb on - strand at 690.939 kb on + strand at 690.939 kb on + strand at 691.038 kb on + strand, within IAI46_03210 at 691.038 kb on + strand, within IAI46_03210 at 691.039 kb on - strand, within IAI46_03210 at 691.088 kb on - strand, within IAI46_03210 at 691.099 kb on + strand, within IAI46_03210 at 691.120 kb on - strand, within IAI46_03210 at 691.120 kb on - strand, within IAI46_03210 at 691.148 kb on + strand, within IAI46_03210 at 691.148 kb on + strand, within IAI46_03210 at 691.148 kb on + strand, within IAI46_03210 at 691.148 kb on + strand, within IAI46_03210 at 691.148 kb on + strand, within IAI46_03210 at 691.148 kb on + strand, within IAI46_03210 at 691.149 kb on - strand, within IAI46_03210 at 691.157 kb on - strand, within IAI46_03210 at 691.157 kb on - strand, within IAI46_03210 at 691.157 kb on - strand, within IAI46_03210 at 691.259 kb on + strand, within IAI46_03210 at 691.260 kb on - strand, within IAI46_03210 at 691.274 kb on + strand, within IAI46_03210 at 691.337 kb on + strand, within IAI46_03210 at 691.526 kb on + strand at 691.527 kb on - strand at 691.539 kb on - strand at 691.559 kb on + strand at 691.559 kb on + strand at 691.559 kb on + strand at 691.579 kb on + strand at 691.580 kb on - strand at 691.592 kb on + strand at 691.593 kb on - strand at 691.593 kb on - strand at 691.601 kb on + strand at 691.601 kb on + strand at 691.601 kb on + strand at 691.601 kb on + strand at 691.602 kb on - strand at 691.602 kb on - strand at 691.633 kb on + strand at 691.633 kb on + strand at 691.633 kb on + strand at 691.648 kb on - strand at 691.649 kb on + strand at 691.649 kb on + strand at 691.649 kb on + strand at 691.649 kb on + strand at 691.649 kb on + strand at 691.649 kb on + strand at 691.649 kb on + strand at 691.649 kb on + strand at 691.650 kb on - strand at 691.650 kb on - strand at 691.650 kb on - strand at 691.650 kb on - strand at 691.650 kb on - strand at 691.650 kb on - strand at 691.893 kb on + strand, within IAI46_03215 at 691.894 kb on - strand, within IAI46_03215 at 691.894 kb on - strand, within IAI46_03215 at 691.926 kb on + strand, within IAI46_03215 at 692.018 kb on + strand, within IAI46_03215 at 692.019 kb on - strand, within IAI46_03215 at 692.019 kb on - strand, within IAI46_03215 at 692.019 kb on - strand, within IAI46_03215 at 692.019 kb on - strand, within IAI46_03215 at 692.094 kb on + strand, within IAI46_03215 at 692.095 kb on - strand, within IAI46_03215 at 692.113 kb on - strand, within IAI46_03215 at 692.161 kb on - strand, within IAI46_03215 at 692.261 kb on + strand, within IAI46_03215 at 692.261 kb on + strand, within IAI46_03215 at 692.262 kb on - strand, within IAI46_03215 at 692.262 kb on - strand, within IAI46_03215 at 692.293 kb on - strand, within IAI46_03215 at 692.379 kb on + strand at 692.446 kb on + strand at 692.456 kb on + strand at 692.456 kb on + strand at 692.457 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, anaerobic remove 689,900 + IAI46_03205 0.49 -1.9 689,901 - IAI46_03205 0.49 -0.6 690,043 + IAI46_03205 0.57 +2.9 690,229 + IAI46_03205 0.67 -0.8 690,241 + IAI46_03205 0.68 +0.1 690,242 - IAI46_03205 0.68 -0.4 690,245 - IAI46_03205 0.68 -0.2 690,259 + IAI46_03205 0.69 +0.0 690,259 + IAI46_03205 0.69 +0.3 690,260 - IAI46_03205 0.69 +0.6 690,260 - IAI46_03205 0.69 -0.2 690,263 + IAI46_03205 0.69 +0.7 690,263 + IAI46_03205 0.69 -0.2 690,263 + IAI46_03205 0.69 +0.3 690,263 + IAI46_03205 0.69 +0.7 690,264 - IAI46_03205 0.69 -0.1 690,264 - IAI46_03205 0.69 -0.2 690,264 - IAI46_03205 0.69 +0.4 690,264 - IAI46_03205 0.69 +0.2 690,293 + IAI46_03205 0.70 -0.7 690,331 - IAI46_03205 0.72 +0.1 690,331 - IAI46_03205 0.72 +0.3 690,331 - IAI46_03205 0.72 -0.6 690,518 - IAI46_03205 0.82 +0.2 690,626 + IAI46_03205 0.88 -1.3 690,627 - IAI46_03205 0.88 +0.0 690,639 + IAI46_03205 0.89 -0.3 690,640 - IAI46_03205 0.89 -0.2 690,640 - IAI46_03205 0.89 +0.4 690,641 + IAI46_03205 0.89 +0.1 690,642 - IAI46_03205 0.89 +0.4 690,672 - -0.2 690,675 + +0.3 690,840 + -0.2 690,887 + -0.7 690,888 - +0.6 690,939 + +0.1 690,939 + -0.1 691,038 + IAI46_03210 0.25 -0.7 691,038 + IAI46_03210 0.25 -0.5 691,039 - IAI46_03210 0.25 +1.0 691,088 - IAI46_03210 0.33 -0.3 691,099 + IAI46_03210 0.35 +1.1 691,120 - IAI46_03210 0.38 +1.3 691,120 - IAI46_03210 0.38 +0.9 691,148 + IAI46_03210 0.43 -1.2 691,148 + IAI46_03210 0.43 -0.1 691,148 + IAI46_03210 0.43 +0.3 691,148 + IAI46_03210 0.43 +0.3 691,148 + IAI46_03210 0.43 +0.4 691,148 + IAI46_03210 0.43 +0.8 691,149 - IAI46_03210 0.43 -0.2 691,157 - IAI46_03210 0.44 +0.1 691,157 - IAI46_03210 0.44 -0.2 691,157 - IAI46_03210 0.44 +0.6 691,259 + IAI46_03210 0.61 -0.5 691,260 - IAI46_03210 0.61 -0.0 691,274 + IAI46_03210 0.63 +0.3 691,337 + IAI46_03210 0.73 -0.2 691,526 + -0.2 691,527 - -1.7 691,539 - +0.1 691,559 + +0.4 691,559 + +0.2 691,559 + +0.1 691,579 + +0.1 691,580 - +0.4 691,592 + +0.1 691,593 - +0.0 691,593 - +1.7 691,601 + +0.2 691,601 + -1.4 691,601 + +0.1 691,601 + -0.7 691,602 - +0.6 691,602 - +0.1 691,633 + +0.1 691,633 + -1.5 691,633 + +0.0 691,648 - +0.2 691,649 + -0.9 691,649 + +0.5 691,649 + +0.4 691,649 + +0.0 691,649 + -1.3 691,649 + -0.5 691,649 + -0.7 691,649 + +0.5 691,650 - +0.7 691,650 - +0.8 691,650 - +0.8 691,650 - +0.0 691,650 - -0.2 691,650 - -0.3 691,893 + IAI46_03215 0.33 +0.9 691,894 - IAI46_03215 0.33 +0.5 691,894 - IAI46_03215 0.33 +0.1 691,926 + IAI46_03215 0.37 -0.1 692,018 + IAI46_03215 0.48 +1.4 692,019 - IAI46_03215 0.49 +0.1 692,019 - IAI46_03215 0.49 +0.1 692,019 - IAI46_03215 0.49 +0.5 692,019 - IAI46_03215 0.49 +0.7 692,094 + IAI46_03215 0.58 +0.5 692,095 - IAI46_03215 0.58 +1.0 692,113 - IAI46_03215 0.60 -0.4 692,161 - IAI46_03215 0.66 +1.0 692,261 + IAI46_03215 0.79 +0.8 692,261 + IAI46_03215 0.79 +0.5 692,262 - IAI46_03215 0.79 -0.9 692,262 - IAI46_03215 0.79 +0.5 692,293 - IAI46_03215 0.83 -0.3 692,379 + -0.2 692,446 + +0.9 692,456 + -0.7 692,456 + +0.4 692,457 - +0.8
Or see this region's nucleotide sequence