Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_01910 and IAI46_01915 are separated by 77 nucleotides IAI46_01915 and IAI46_01920 are separated by 60 nucleotides IAI46_01920 and IAI46_01925 are separated by 217 nucleotides IAI46_01925 and IAI46_01930 are separated by 21 nucleotides IAI46_01930 and IAI46_01935 are separated by 24 nucleotides
IAI46_01910: IAI46_01910 - preprotein translocase subunit SecG, at 410,976 to 411,311
_01910
IAI46_01915: IAI46_01915 - tRNA-Leu, at 411,389 to 411,475
_01915
IAI46_01920: IAI46_01920 - tRNA-Met, at 411,536 to 411,612
_01920
IAI46_01925: IAI46_01925 - ribosome maturation factor RimP, at 411,830 to 412,282
_01925
IAI46_01930: IAI46_01930 - transcription termination/antitermination protein NusA, at 412,304 to 413,812
_01930
IAI46_01935: IAI46_01935 - translation initiation factor IF-2, at 413,837 to 416,524
_01935
Position (kb) 412
413
414 Strain fitness (log2 ratio) -1
0
1 at 411.323 kb on + strand at 411.346 kb on + strand at 411.349 kb on + strand at 411.357 kb on + strand at 411.357 kb on + strand at 411.488 kb on - strand at 411.517 kb on + strand at 412.100 kb on + strand, within IAI46_01925 at 413.395 kb on + strand, within IAI46_01930 at 413.395 kb on + strand, within IAI46_01930 at 413.461 kb on + strand, within IAI46_01930 at 413.527 kb on + strand, within IAI46_01930 at 413.686 kb on + strand at 413.743 kb on + strand at 413.782 kb on + strand at 413.782 kb on + strand at 413.782 kb on + strand at 413.785 kb on + strand at 413.785 kb on + strand at 413.785 kb on + strand at 413.785 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, anaerobic remove 411,323 + -0.0 411,346 + -0.1 411,349 + -0.0 411,357 + -0.0 411,357 + -1.1 411,488 - +0.3 411,517 + -0.0 412,100 + IAI46_01925 0.60 -0.0 413,395 + IAI46_01930 0.72 -0.3 413,395 + IAI46_01930 0.72 -0.3 413,461 + IAI46_01930 0.77 -0.5 413,527 + IAI46_01930 0.81 +0.3 413,686 + +0.4 413,743 + +0.4 413,782 + +0.6 413,782 + +0.1 413,782 + +0.2 413,785 + -0.3 413,785 + +0.5 413,785 + +0.4 413,785 + -0.1
Or see this region's nucleotide sequence