Experiment: Manganese (II) chloride tetrahydrate 50 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_01895 and IAI46_01900 are separated by 92 nucleotides IAI46_01900 and IAI46_01905 are separated by 7 nucleotides IAI46_01905 and IAI46_01910 are separated by 252 nucleotides IAI46_01910 and IAI46_01915 are separated by 77 nucleotides IAI46_01915 and IAI46_01920 are separated by 60 nucleotides
IAI46_01895: IAI46_01895 - ATP-dependent zinc metalloprotease FtsH, at 406,521 to 408,452
_01895
IAI46_01900: IAI46_01900 - dihydropteroate synthase, at 408,545 to 409,378
_01900
IAI46_01905: IAI46_01905 - phosphoglucosamine mutase, at 409,386 to 410,723
_01905
IAI46_01910: IAI46_01910 - preprotein translocase subunit SecG, at 410,976 to 411,311
_01910
IAI46_01915: IAI46_01915 - tRNA-Leu, at 411,389 to 411,475
_01915
IAI46_01920: IAI46_01920 - tRNA-Met, at 411,536 to 411,612
_01920
Position (kb) 409
410
411 Strain fitness (log2 ratio) -2
-1
0
1 at 408.425 kb on + strand at 408.425 kb on + strand at 408.425 kb on + strand at 408.450 kb on + strand at 408.450 kb on + strand at 408.450 kb on + strand at 408.450 kb on + strand at 408.451 kb on - strand at 408.464 kb on + strand at 408.464 kb on + strand at 408.464 kb on + strand at 408.465 kb on - strand at 408.467 kb on + strand at 408.467 kb on + strand at 408.467 kb on + strand at 408.468 kb on - strand at 408.468 kb on - strand at 408.530 kb on + strand at 408.530 kb on + strand at 408.540 kb on + strand at 408.540 kb on + strand at 410.784 kb on - strand at 410.784 kb on - strand at 410.885 kb on + strand at 410.885 kb on + strand at 410.887 kb on + strand at 410.887 kb on + strand at 410.887 kb on + strand at 410.907 kb on + strand at 410.913 kb on + strand at 410.913 kb on + strand at 410.969 kb on + strand at 410.975 kb on + strand at 410.975 kb on + strand at 410.975 kb on + strand at 410.975 kb on + strand at 410.975 kb on + strand at 410.975 kb on + strand at 411.035 kb on + strand, within IAI46_01910 at 411.035 kb on + strand, within IAI46_01910 at 411.323 kb on + strand at 411.346 kb on + strand at 411.349 kb on + strand at 411.357 kb on + strand at 411.357 kb on + strand at 411.488 kb on - strand at 411.517 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, anaerobic remove 408,425 + +0.7 408,425 + +0.3 408,425 + -0.8 408,450 + -0.7 408,450 + -0.1 408,450 + +0.0 408,450 + -1.7 408,451 - -0.6 408,464 + -0.6 408,464 + +0.6 408,464 + +0.3 408,465 - +0.5 408,467 + +0.3 408,467 + -0.8 408,467 + -0.8 408,468 - +0.3 408,468 - +0.7 408,530 + +0.5 408,530 + +1.7 408,540 + -0.7 408,540 + -1.8 410,784 - -0.0 410,784 - +1.2 410,885 + -0.1 410,885 + -0.6 410,887 + +0.2 410,887 + +0.5 410,887 + +0.1 410,907 + +0.2 410,913 + -2.2 410,913 + +0.8 410,969 + +1.0 410,975 + +0.2 410,975 + -0.2 410,975 + -0.2 410,975 + +0.9 410,975 + -0.2 410,975 + +0.2 411,035 + IAI46_01910 0.18 +0.6 411,035 + IAI46_01910 0.18 +0.1 411,323 + -0.0 411,346 + -0.1 411,349 + -0.0 411,357 + -0.0 411,357 + -1.1 411,488 - +0.3 411,517 + -0.0
Or see this region's nucleotide sequence