Strain Fitness in Bosea sp. OAE506 around ABIE41_RS06680

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
1,368,911	+		ABIE41_RS06675	0.37	+0.4
1,368,912	-		ABIE41_RS06675	0.37	-0.2
1,369,051	+		ABIE41_RS06675	0.48	+1.8
1,369,052	-		ABIE41_RS06675	0.48	+0.2
1,369,178	+		ABIE41_RS06675	0.58	+0.9
1,369,178	+		ABIE41_RS06675	0.58	-0.3
1,369,178	+		ABIE41_RS06675	0.58	+1.4
1,369,178	+		ABIE41_RS06675	0.58	-0.4
1,369,178	+		ABIE41_RS06675	0.58	+0.0
1,369,178	+		ABIE41_RS06675	0.58	+1.2
1,369,179	-		ABIE41_RS06675	0.58	+0.1
1,369,179	-		ABIE41_RS06675	0.58	-0.6
1,369,179	-		ABIE41_RS06675	0.58	+0.6
1,369,179	-		ABIE41_RS06675	0.58	+0.3
1,369,179	-		ABIE41_RS06675	0.58	+0.5
1,369,196	+		ABIE41_RS06675	0.59	+0.8
1,369,198	-		ABIE41_RS06675	0.59	+0.4
1,369,198	-		ABIE41_RS06675	0.59	-1.3
1,369,198	-		ABIE41_RS06675	0.59	-0.5
1,369,198	-		ABIE41_RS06675	0.59	+0.2
1,369,205	+		ABIE41_RS06675	0.60	+0.2
1,369,337	-		ABIE41_RS06675	0.70	+2.6
1,369,354	-		ABIE41_RS06675	0.71	+2.4
1,369,376	+		ABIE41_RS06675	0.73	-0.6
1,369,376	+		ABIE41_RS06675	0.73	-0.6
1,369,376	+		ABIE41_RS06675	0.73	+0.8
1,369,376	+		ABIE41_RS06675	0.73	-0.5
1,369,376	+		ABIE41_RS06675	0.73	-0.9
1,369,376	+		ABIE41_RS06675	0.73	-0.9
1,369,376	+		ABIE41_RS06675	0.73	-0.7
1,369,376	+		ABIE41_RS06675	0.73	-0.4
1,369,376	+		ABIE41_RS06675	0.73	+0.1
1,369,376	+		ABIE41_RS06675	0.73	-0.9
1,369,376	+		ABIE41_RS06675	0.73	-0.4
1,369,376	+		ABIE41_RS06675	0.73	-0.4
1,369,376	+		ABIE41_RS06675	0.73	+1.3
1,369,376	+		ABIE41_RS06675	0.73	+0.0
1,369,376	+		ABIE41_RS06675	0.73	-0.4
1,369,376	+		ABIE41_RS06675	0.73	-0.2
1,369,377	-		ABIE41_RS06675	0.73	+1.4
1,369,377	-		ABIE41_RS06675	0.73	+1.1
1,369,377	-		ABIE41_RS06675	0.73	-0.5
1,369,377	-		ABIE41_RS06675	0.73	-1.3
1,369,377	-		ABIE41_RS06675	0.73	+1.1
1,369,377	-		ABIE41_RS06675	0.73	+0.7
1,369,377	-		ABIE41_RS06675	0.73	-0.2
1,369,377	-		ABIE41_RS06675	0.73	+1.8
1,369,377	-		ABIE41_RS06675	0.73	-0.3
1,369,377	-		ABIE41_RS06675	0.73	-2.5
1,369,377	-		ABIE41_RS06675	0.73	+0.0
1,369,396	+		ABIE41_RS06675	0.75	+0.4
1,369,396	+		ABIE41_RS06675	0.75	-0.9
1,369,396	+		ABIE41_RS06675	0.75	+0.2
1,369,397	-		ABIE41_RS06675	0.75	-0.2
1,369,397	-		ABIE41_RS06675	0.75	+0.3
1,369,452	+		ABIE41_RS06675	0.79	+1.3
1,369,453	-		ABIE41_RS06675	0.79	+3.9
1,369,468	+		ABIE41_RS06675	0.80	-1.7
1,369,468	+		ABIE41_RS06675	0.80	+0.4
1,369,469	-		ABIE41_RS06675	0.80	+1.6
1,369,469	-		ABIE41_RS06675	0.80	+1.1
1,369,533	+		ABIE41_RS06675	0.85	+0.1
1,369,533	+		ABIE41_RS06675	0.85	-0.4
1,369,533	+		ABIE41_RS06675	0.85	-0.3
1,369,533	+		ABIE41_RS06675	0.85	+2.1
1,369,533	+		ABIE41_RS06675	0.85	+1.8
1,369,534	-		ABIE41_RS06675	0.85	-1.8
1,369,534	-		ABIE41_RS06675	0.85	-1.6
1,369,534	-		ABIE41_RS06675	0.85	+0.1
1,369,547	+		ABIE41_RS06675	0.86	-1.2
1,369,547	+		ABIE41_RS06675	0.86	+0.4
1,369,547	+		ABIE41_RS06675	0.86	+1.1
1,369,547	+		ABIE41_RS06675	0.86	+2.2
1,369,548	-		ABIE41_RS06675	0.87	-0.7
1,369,548	-		ABIE41_RS06675	0.87	-1.3
1,369,673	+				+0.5
1,369,673	+				+0.2
1,369,673	+				+0.2
1,369,673	+				-2.3
1,369,673	+				-0.0
1,369,673	+				-1.1
1,369,673	+				+0.0
1,369,673	+				+0.8
1,369,673	+				-2.2
1,369,673	+				-1.3
1,369,674	-				+0.0
1,369,674	-				+0.1
1,369,674	-				+0.6
1,369,674	-				+0.3
1,369,674	-				+0.7
1,369,674	-				+0.1
1,369,674	-				-1.0
1,369,674	-				+0.5
1,369,674	-				+0.6
1,369,674	-				-0.4
1,369,674	-				+0.7
1,369,674	-				+1.9
1,369,674	-				-1.2
1,369,674	-				-1.1
1,369,674	-				-0.0
1,369,674	-				+0.3
1,369,674	-				+1.4
1,369,674	-				+0.2
1,369,742	+				-0.2
1,369,742	+				-0.2
1,369,742	+				-0.3
1,369,742	+				+0.3
1,369,742	+				+0.2
1,369,743	-				-0.2
1,369,743	-				+1.2
1,369,743	-				-0.0
1,369,743	-				-0.6
1,369,743	-				-0.3
1,369,784	+				-1.0
1,369,784	+				+1.8
1,369,784	+				-1.2
1,369,784	+				-0.3
1,369,785	-				-1.3
1,369,785	-				-0.2
1,369,807	+				+0.6
1,369,807	+				-1.1
1,369,807	+				-1.5
1,369,807	+				-0.1
1,369,808	-				-2.0
1,369,808	-				+0.0
1,369,808	-				-0.2
1,369,808	-				-0.6
1,369,808	-				+0.9
1,369,832	+		ABIE41_RS06680	0.12	+0.3
1,369,833	-		ABIE41_RS06680	0.12	-1.1
1,369,867	+		ABIE41_RS06680	0.15	-0.8
1,369,867	+		ABIE41_RS06680	0.15	-0.7
1,369,867	+		ABIE41_RS06680	0.15	-1.1
1,369,868	-		ABIE41_RS06680	0.16	-0.2
1,369,868	-		ABIE41_RS06680	0.16	+0.1
1,369,868	-		ABIE41_RS06680	0.16	+1.2
1,369,868	-		ABIE41_RS06680	0.16	+0.9
1,369,868	-		ABIE41_RS06680	0.16	+0.2
1,369,868	-		ABIE41_RS06680	0.16	-0.3
1,369,869	+		ABIE41_RS06680	0.16	+0.1
1,369,869	+		ABIE41_RS06680	0.16	-1.8
1,369,943	+		ABIE41_RS06680	0.23	-1.8
1,369,943	+		ABIE41_RS06680	0.23	+0.8
1,369,944	-		ABIE41_RS06680	0.23	-0.7
1,369,944	-		ABIE41_RS06680	0.23	-0.3
1,369,944	-		ABIE41_RS06680	0.23	+0.5
1,369,944	-		ABIE41_RS06680	0.23	-1.5
1,369,944	-		ABIE41_RS06680	0.23	-0.9
1,369,944	-		ABIE41_RS06680	0.23	+0.1
1,369,944	-		ABIE41_RS06680	0.23	-0.3
1,369,944	-		ABIE41_RS06680	0.23	-0.1
1,370,016	-		ABIE41_RS06680	0.31	-0.1
1,370,053	+		ABIE41_RS06680	0.35	+0.1
1,370,053	+		ABIE41_RS06680	0.35	-0.5
1,370,053	+		ABIE41_RS06680	0.35	-3.1
1,370,053	+		ABIE41_RS06680	0.35	-0.7
1,370,053	+		ABIE41_RS06680	0.35	-2.1
1,370,053	+		ABIE41_RS06680	0.35	+1.0
1,370,053	+		ABIE41_RS06680	0.35	-0.7
1,370,054	-		ABIE41_RS06680	0.35	-0.5
1,370,054	-		ABIE41_RS06680	0.35	+1.0
1,370,054	-		ABIE41_RS06680	0.35	-0.5
1,370,054	-		ABIE41_RS06680	0.35	+0.5
1,370,054	-		ABIE41_RS06680	0.35	+0.5
1,370,096	-		ABIE41_RS06680	0.39	+0.6
1,370,125	+		ABIE41_RS06680	0.42	-1.7
1,370,125	+		ABIE41_RS06680	0.42	-0.3
1,370,125	+		ABIE41_RS06680	0.42	-0.2
1,370,126	-		ABIE41_RS06680	0.42	-0.7
1,370,126	-		ABIE41_RS06680	0.42	-0.1
1,370,205	+		ABIE41_RS06680	0.50	+0.8
1,370,205	+		ABIE41_RS06680	0.50	-1.1
1,370,205	+		ABIE41_RS06680	0.50	-0.8
1,370,205	+		ABIE41_RS06680	0.50	-2.6
1,370,206	-		ABIE41_RS06680	0.50	-0.5
1,370,206	-		ABIE41_RS06680	0.50	+1.6
1,370,245	+		ABIE41_RS06680	0.54	+1.4
1,370,245	+		ABIE41_RS06680	0.54	-0.3
1,370,245	+		ABIE41_RS06680	0.54	+0.0
1,370,245	+		ABIE41_RS06680	0.54	-1.0
1,370,245	+		ABIE41_RS06680	0.54	+0.7
1,370,246	-		ABIE41_RS06680	0.54	+0.2
1,370,246	-		ABIE41_RS06680	0.54	-1.8
1,370,246	-		ABIE41_RS06680	0.54	+0.3
1,370,246	-		ABIE41_RS06680	0.54	-0.2
1,370,246	-		ABIE41_RS06680	0.54	+1.6
1,370,246	-		ABIE41_RS06680	0.54	+0.6
1,370,246	-		ABIE41_RS06680	0.54	-1.4
1,370,260	+		ABIE41_RS06680	0.56	-1.5
1,370,260	+		ABIE41_RS06680	0.56	-0.7
1,370,260	+		ABIE41_RS06680	0.56	-0.3
1,370,260	+		ABIE41_RS06680	0.56	-0.5
1,370,260	+		ABIE41_RS06680	0.56	-1.6
1,370,260	+		ABIE41_RS06680	0.56	+2.1
1,370,260	+		ABIE41_RS06680	0.56	-0.8
1,370,260	+		ABIE41_RS06680	0.56	-2.1
1,370,260	+		ABIE41_RS06680	0.56	+0.1
1,370,261	-		ABIE41_RS06680	0.56	-0.2
1,370,261	-		ABIE41_RS06680	0.56	+0.4
1,370,261	-		ABIE41_RS06680	0.56	-0.4
1,370,261	-		ABIE41_RS06680	0.56	+0.7
1,370,261	-		ABIE41_RS06680	0.56	+0.6
1,370,261	-		ABIE41_RS06680	0.56	+1.0
1,370,261	-		ABIE41_RS06680	0.56	+0.6
1,370,261	-		ABIE41_RS06680	0.56	+0.4
1,370,261	-		ABIE41_RS06680	0.56	-1.0
1,370,261	-		ABIE41_RS06680	0.56	-0.9
1,370,261	-		ABIE41_RS06680	0.56	-0.3
1,370,282	+		ABIE41_RS06680	0.58	-0.1
1,370,282	+		ABIE41_RS06680	0.58	+0.8
1,370,283	-		ABIE41_RS06680	0.58	+0.2
1,370,382	+		ABIE41_RS06680	0.68	+0.7
1,370,382	+		ABIE41_RS06680	0.68	-1.4
1,370,382	+		ABIE41_RS06680	0.68	-0.4
1,370,382	+		ABIE41_RS06680	0.68	+0.7
1,370,382	+		ABIE41_RS06680	0.68	+0.2
1,370,382	+		ABIE41_RS06680	0.68	+0.0
1,370,382	+		ABIE41_RS06680	0.68	+0.3
1,370,383	+		ABIE41_RS06680	0.69	-0.5
1,370,383	-		ABIE41_RS06680	0.69	+0.8
1,370,383	-		ABIE41_RS06680	0.69	+1.9
1,370,383	-		ABIE41_RS06680	0.69	+1.3
1,370,383	-		ABIE41_RS06680	0.69	+1.4
1,370,417	+		ABIE41_RS06680	0.72	+0.1
1,370,417	+		ABIE41_RS06680	0.72	-2.0
1,370,451	+		ABIE41_RS06680	0.76	-0.1
1,370,451	+		ABIE41_RS06680	0.76	+0.3
1,370,451	+		ABIE41_RS06680	0.76	+0.2
1,370,451	+		ABIE41_RS06680	0.76	-2.0
1,370,451	+		ABIE41_RS06680	0.76	+1.4
1,370,451	+		ABIE41_RS06680	0.76	+0.6
1,370,451	+		ABIE41_RS06680	0.76	-1.1
1,370,451	+		ABIE41_RS06680	0.76	-1.5
1,370,451	+		ABIE41_RS06680	0.76	-1.4
1,370,451	+		ABIE41_RS06680	0.76	+1.4
1,370,451	+		ABIE41_RS06680	0.76	-0.3
1,370,451	+		ABIE41_RS06680	0.76	-0.1
1,370,451	+		ABIE41_RS06680	0.76	-0.3
1,370,451	+		ABIE41_RS06680	0.76	-0.9
1,370,452	-		ABIE41_RS06680	0.76	-0.4
1,370,452	-		ABIE41_RS06680	0.76	+0.7
1,370,452	-		ABIE41_RS06680	0.76	+0.2
1,370,452	-		ABIE41_RS06680	0.76	+0.1
1,370,452	-		ABIE41_RS06680	0.76	+0.5
1,370,452	-		ABIE41_RS06680	0.76	-0.6
1,370,452	-		ABIE41_RS06680	0.76	+0.5
1,370,452	-		ABIE41_RS06680	0.76	-1.8
1,370,452	-		ABIE41_RS06680	0.76	-0.9
1,370,452	-		ABIE41_RS06680	0.76	+0.5
1,370,452	-		ABIE41_RS06680	0.76	-0.0
1,370,457	+		ABIE41_RS06680	0.76	-1.8
1,370,489	+		ABIE41_RS06680	0.79	+0.5
1,370,529	+		ABIE41_RS06680	0.84	+0.2
1,370,529	+		ABIE41_RS06680	0.84	-1.2
1,370,530	-		ABIE41_RS06680	0.84	+0.3
1,370,538	+		ABIE41_RS06680	0.84	-0.3
1,370,538	+		ABIE41_RS06680	0.84	-1.1
1,370,539	-		ABIE41_RS06680	0.85	+0.0
1,370,539	-		ABIE41_RS06680	0.85	+0.0
1,370,539	-		ABIE41_RS06680	0.85	+0.4
1,370,539	-		ABIE41_RS06680	0.85	+0.1
1,370,539	-		ABIE41_RS06680	0.85	+0.5
1,370,606	-				+0.2
1,370,606	-				-0.1
1,370,609	+				-0.2
1,370,609	+				+0.4
1,370,609	+				-0.5
1,370,609	+				-0.4
1,370,609	+				-0.3
1,370,609	+				+0.0
1,370,609	+				+2.1
1,370,609	+				-2.5
1,370,609	+				-1.2
1,370,609	+				-0.2
1,370,609	+				-0.2
1,370,609	+				-1.7
1,370,609	+				-0.0
1,370,610	-				-0.7
1,370,610	-				-0.3
1,370,610	-				+0.4
1,370,610	-				-0.5
1,370,610	-				+1.1
1,370,610	-				+0.1
1,370,610	-				-2.5
1,370,610	-				-1.1
1,370,610	-				+0.1
1,370,610	-				+2.1
1,370,610	-				-0.2
1,370,610	-				+0.6
1,370,610	-				-2.1
1,370,610	-				-0.5
1,370,610	-				-1.1
1,370,610	-				-0.4
1,370,610	-				-0.1
1,370,631	+				+0.2
1,370,632	-				+1.9
1,370,664	+				-0.9
1,370,664	+				-0.7
1,370,664	+				+0.1
1,370,665	-				-0.3
1,370,665	-				+0.5
1,370,665	-				+1.2
1,370,665	-				+0.1
1,370,684	-				+1.1
1,370,706	+				-0.0
1,370,706	+				+1.0
1,370,706	+				+0.9
1,370,706	+				-1.4
1,370,706	+				+0.1
1,370,706	+				+0.1
1,370,706	+				-1.1
1,370,706	+				+0.9
1,370,706	+				-2.9
1,370,707	-				-0.2
1,370,707	-				-0.5
1,370,707	-				-1.1
1,370,707	-				-1.6
1,370,707	-				+0.4
1,370,707	-				+1.2
1,370,797	-				+0.4
1,370,797	-				-0.1
1,370,824	+				+0.1
1,370,824	+				-0.6
1,370,825	-				-0.2
1,370,825	-				+0.5
1,370,931	+				-2.2
1,370,931	+				+0.1
1,370,932	-				-0.1
1,371,065	+		ABIE41_RS06685	0.82	+1.2
1,371,065	+		ABIE41_RS06685	0.82	+0.5
1,371,065	+		ABIE41_RS06685	0.82	-0.1
1,371,066	-		ABIE41_RS06685	0.82	-2.7
1,371,066	-		ABIE41_RS06685	0.82	-0.9
1,371,066	-		ABIE41_RS06685	0.82	-0.5
1,371,066	-		ABIE41_RS06685	0.82	+0.4
1,371,066	-		ABIE41_RS06685	0.82	+0.8
1,371,066	-		ABIE41_RS06685	0.82	-0.1
1,371,097	+				-0.4
1,371,097	+				+0.8
1,371,097	+				+0.7
1,371,126	-				-0.6
1,371,126	-				+2.1
1,371,216	+				-1.2
1,371,216	+				-0.5
1,371,216	+				+1.3
1,371,216	+				-1.4
1,371,216	+				-0.9
1,371,216	+				-1.2
1,371,216	+				-0.3
1,371,216	+				-0.5
1,371,216	+				+0.9
1,371,216	+				-0.4
1,371,216	+				+0.4
1,371,216	+				-0.5
1,371,216	+				+0.1
1,371,216	+				-0.4
1,371,217	-				+1.7
1,371,217	-				+0.1
1,371,217	-				+0.2
1,371,217	-				-0.4
1,371,217	-				-0.4
1,371,217	-				+1.1
1,371,217	-				+0.5
1,371,217	-				-0.7
1,371,217	-				-0.2
1,371,261	+		ABIE41_RS06690	0.14	+1.0
1,371,261	+		ABIE41_RS06690	0.14	-2.1
1,371,262	-		ABIE41_RS06690	0.14	+0.2
1,371,262	-		ABIE41_RS06690	0.14	+0.8
1,371,262	-		ABIE41_RS06690	0.14	+1.0
1,371,262	-		ABIE41_RS06690	0.14	+1.1
1,371,262	-		ABIE41_RS06690	0.14	-0.0
1,371,335	+		ABIE41_RS06690	0.36	-0.5
1,371,427	+		ABIE41_RS06690	0.63	+0.2
1,371,427	+		ABIE41_RS06690	0.63	-0.7
1,371,427	+		ABIE41_RS06690	0.63	-0.8
1,371,427	+		ABIE41_RS06690	0.63	-0.5
1,371,427	+		ABIE41_RS06690	0.63	-0.1
1,371,427	+		ABIE41_RS06690	0.63	-0.7
1,371,427	+		ABIE41_RS06690	0.63	-0.4
1,371,427	+		ABIE41_RS06690	0.63	+0.5
1,371,427	+		ABIE41_RS06690	0.63	+0.3
1,371,427	+		ABIE41_RS06690	0.63	+2.1
1,371,427	+		ABIE41_RS06690	0.63	+0.2
1,371,427	+		ABIE41_RS06690	0.63	+0.2
1,371,427	+		ABIE41_RS06690	0.63	+0.1
1,371,427	+		ABIE41_RS06690	0.63	+0.2
1,371,427	+		ABIE41_RS06690	0.63	+0.1
1,371,427	+		ABIE41_RS06690	0.63	+1.0
1,371,427	+		ABIE41_RS06690	0.63	+0.3
1,371,428	-		ABIE41_RS06690	0.63	+0.5
1,371,428	-		ABIE41_RS06690	0.63	-0.8
1,371,428	-		ABIE41_RS06690	0.63	+1.2
1,371,428	-		ABIE41_RS06690	0.63	-0.0
1,371,428	-		ABIE41_RS06690	0.63	-0.6
1,371,428	-		ABIE41_RS06690	0.63	+0.9
1,371,428	-		ABIE41_RS06690	0.63	+1.6
1,371,428	-		ABIE41_RS06690	0.63	-0.1
1,371,428	-		ABIE41_RS06690	0.63	+0.8
1,371,428	-		ABIE41_RS06690	0.63	+2.0
1,371,428	-		ABIE41_RS06690	0.63	-1.1
1,371,428	-		ABIE41_RS06690	0.63	-0.1
1,371,428	-		ABIE41_RS06690	0.63	+0.3
1,371,428	-		ABIE41_RS06690	0.63	+1.4
1,371,534	+				+0.3
1,371,558	-				-0.7
1,371,558	-				-0.7
1,371,579	-		ABIE41_RS06695	0.11	-1.5
1,371,579	-		ABIE41_RS06695	0.11	-0.8
1,371,579	-		ABIE41_RS06695	0.11	+0.2
1,371,579	-		ABIE41_RS06695	0.11	+1.1
1,371,579	-		ABIE41_RS06695	0.11	-0.7
1,371,579	-		ABIE41_RS06695	0.11	+0.0
1,371,607	+		ABIE41_RS06695	0.21	+0.8
1,371,607	+		ABIE41_RS06695	0.21	-0.1
1,371,607	+		ABIE41_RS06695	0.21	-0.8
1,371,608	-		ABIE41_RS06695	0.21	+0.2
1,371,608	-		ABIE41_RS06695	0.21	-0.7
1,371,608	-		ABIE41_RS06695	0.21	-1.5
1,371,608	-		ABIE41_RS06695	0.21	+0.2