Strain Fitness in Bosea sp. OAE506 around ABIE41_RS05425

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
1,122,080	+				+1.1
1,122,080	+				+0.0
1,122,081	-				-0.6
1,122,081	-				+1.1
1,122,081	-				+1.0
1,122,081	-				-0.1
1,122,138	+				-0.1
1,122,138	+				+0.5
1,122,138	+				+0.2
1,122,138	+				+0.3
1,122,138	+				+2.0
1,122,138	+				-0.2
1,122,138	+				+0.5
1,122,138	+				-0.0
1,122,138	+				+0.3
1,122,138	+				+1.9
1,122,138	+				+1.2
1,122,138	+				-0.4
1,122,138	+				+0.3
1,122,139	-				+1.0
1,122,139	-				+0.3
1,122,139	-				-1.6
1,122,139	-				+0.2
1,122,139	-				+0.4
1,122,139	-				-0.7
1,122,139	-				+1.0
1,122,139	-				+0.7
1,122,139	-				-0.2
1,122,139	-				-0.2
1,122,139	-				+0.9
1,122,139	-				-0.8
1,122,519	+		ABIE41_RS05420	0.47	-2.2
1,122,519	+		ABIE41_RS05420	0.47	-0.7
1,122,519	+		ABIE41_RS05420	0.47	-0.9
1,122,519	+		ABIE41_RS05420	0.47	-1.0
1,122,520	-		ABIE41_RS05420	0.47	+0.1
1,122,520	-		ABIE41_RS05420	0.47	+0.1
1,122,520	-		ABIE41_RS05420	0.47	-0.8
1,122,624	+		ABIE41_RS05420	0.58	+1.2
1,122,642	+		ABIE41_RS05420	0.60	-0.2
1,122,642	+		ABIE41_RS05420	0.60	-0.6
1,122,642	+		ABIE41_RS05420	0.60	-0.1
1,122,642	+		ABIE41_RS05420	0.60	-0.9
1,122,674	+		ABIE41_RS05420	0.64	-0.2
1,122,675	+		ABIE41_RS05420	0.64	-2.1
1,122,675	+		ABIE41_RS05420	0.64	-0.1
1,122,675	+		ABIE41_RS05420	0.64	-0.9
1,122,675	+		ABIE41_RS05420	0.64	+1.8
1,122,675	+		ABIE41_RS05420	0.64	-1.1
1,122,675	+		ABIE41_RS05420	0.64	+0.1
1,122,675	+		ABIE41_RS05420	0.64	-0.2
1,122,676	-		ABIE41_RS05420	0.64	-1.6
1,122,676	-		ABIE41_RS05420	0.64	-1.5
1,122,676	-		ABIE41_RS05420	0.64	-0.5
1,122,676	-		ABIE41_RS05420	0.64	-0.1
1,122,676	-		ABIE41_RS05420	0.64	+0.1
1,122,676	-		ABIE41_RS05420	0.64	+0.6
1,122,867	+		ABIE41_RS05420	0.84	-0.7
1,122,867	+		ABIE41_RS05420	0.84	+0.1
1,122,867	+		ABIE41_RS05420	0.84	+0.6
1,122,867	+		ABIE41_RS05420	0.84	+1.6
1,122,868	-		ABIE41_RS05420	0.84	+0.6
1,122,868	-		ABIE41_RS05420	0.84	+1.7
1,122,868	-		ABIE41_RS05420	0.84	-0.5
1,122,868	-		ABIE41_RS05420	0.84	+0.9
1,122,868	-		ABIE41_RS05420	0.84	+0.9
1,122,868	-		ABIE41_RS05420	0.84	-0.5
1,122,868	-		ABIE41_RS05420	0.84	+0.7
1,123,142	+		ABIE41_RS05425	0.14	-0.2
1,123,142	+		ABIE41_RS05425	0.14	-1.0
1,123,143	-		ABIE41_RS05425	0.14	+0.3
1,123,143	-		ABIE41_RS05425	0.14	-0.2
1,123,143	-		ABIE41_RS05425	0.14	-0.1
1,123,208	+		ABIE41_RS05425	0.21	-0.6
1,123,208	+		ABIE41_RS05425	0.21	+0.1
1,123,208	+		ABIE41_RS05425	0.21	-0.2
1,123,208	+		ABIE41_RS05425	0.21	-0.7
1,123,209	-		ABIE41_RS05425	0.21	-0.5
1,123,209	-		ABIE41_RS05425	0.21	-1.7
1,123,209	-		ABIE41_RS05425	0.21	-1.8
1,123,209	-		ABIE41_RS05425	0.21	+0.3
1,123,209	-		ABIE41_RS05425	0.21	-0.4
1,123,271	+		ABIE41_RS05425	0.28	+0.4
1,123,271	+		ABIE41_RS05425	0.28	-0.6
1,123,271	+		ABIE41_RS05425	0.28	+0.9
1,123,272	-		ABIE41_RS05425	0.28	+0.0
1,123,433	+		ABIE41_RS05425	0.46	-0.9
1,123,436	+		ABIE41_RS05425	0.46	-1.0
1,123,436	+		ABIE41_RS05425	0.46	-0.7
1,123,437	-		ABIE41_RS05425	0.46	+1.2
1,123,437	-		ABIE41_RS05425	0.46	+2.3
1,123,536	-		ABIE41_RS05425	0.57	+0.9
1,123,536	-		ABIE41_RS05425	0.57	-0.4
1,123,536	-		ABIE41_RS05425	0.57	-0.9
1,123,536	-		ABIE41_RS05425	0.57	+0.1
1,123,536	-		ABIE41_RS05425	0.57	+1.1
1,123,583	+		ABIE41_RS05425	0.63	+0.3
1,123,673	+		ABIE41_RS05425	0.73	+0.2
1,123,673	+		ABIE41_RS05425	0.73	+0.2
1,123,673	+		ABIE41_RS05425	0.73	+0.1
1,123,674	-		ABIE41_RS05425	0.73	-0.7
1,123,698	-		ABIE41_RS05425	0.75	-0.1
1,123,698	-		ABIE41_RS05425	0.75	-0.5
1,123,698	-		ABIE41_RS05425	0.75	-0.3
1,123,787	+		ABIE41_RS05425	0.85	-0.8
1,123,787	+		ABIE41_RS05425	0.85	-0.1
1,123,787	+		ABIE41_RS05425	0.85	-0.1
1,123,787	+		ABIE41_RS05425	0.85	-0.6
1,123,787	+		ABIE41_RS05425	0.85	+0.3
1,123,787	+		ABIE41_RS05425	0.85	+1.1
1,123,788	-		ABIE41_RS05425	0.85	+1.1
1,123,788	-		ABIE41_RS05425	0.85	-0.7
1,123,788	-		ABIE41_RS05425	0.85	-0.3
1,123,788	-		ABIE41_RS05425	0.85	+0.9
1,124,095	+				+0.1
1,124,096	-				+3.5
1,124,192	+		ABIE41_RS05430	0.13	-0.2
1,124,193	-		ABIE41_RS05430	0.13	-1.4
1,124,193	-		ABIE41_RS05430	0.13	-0.9
1,124,203	+		ABIE41_RS05430	0.14	-0.3
1,124,295	-		ABIE41_RS05430	0.26	-2.9
1,124,295	-		ABIE41_RS05430	0.26	-0.9
1,124,378	+		ABIE41_RS05430	0.37	+0.8
1,124,378	+		ABIE41_RS05430	0.37	+1.5
1,124,379	-		ABIE41_RS05430	0.37	-0.1
1,124,379	-		ABIE41_RS05430	0.37	+0.9
1,124,468	+		ABIE41_RS05430	0.48	+0.1
1,124,468	+		ABIE41_RS05430	0.48	-1.9
1,124,468	+		ABIE41_RS05430	0.48	+0.1
1,124,468	+		ABIE41_RS05430	0.48	+1.0
1,124,468	+		ABIE41_RS05430	0.48	-1.8
1,124,469	-		ABIE41_RS05430	0.48	-0.0
1,124,469	-		ABIE41_RS05430	0.48	-0.5
1,124,517	+		ABIE41_RS05430	0.54	-1.1
1,124,517	+		ABIE41_RS05430	0.54	-2.1
1,124,517	+		ABIE41_RS05430	0.54	+0.3
1,124,517	+		ABIE41_RS05430	0.54	-0.5
1,124,518	-		ABIE41_RS05430	0.54	-1.3
1,124,518	-		ABIE41_RS05430	0.54	+1.1
1,124,518	-		ABIE41_RS05430	0.54	+0.2
1,124,518	-		ABIE41_RS05430	0.54	+0.4
1,124,518	-		ABIE41_RS05430	0.54	-0.1
1,124,518	-		ABIE41_RS05430	0.54	+1.0
1,124,531	+		ABIE41_RS05430	0.56	+0.3
1,124,532	-		ABIE41_RS05430	0.56	-0.2
1,124,532	-		ABIE41_RS05430	0.56	-1.4
1,124,532	-		ABIE41_RS05430	0.56	-0.2
1,124,752	+		ABIE41_RS05430	0.84	+1.1
1,124,893	+				-0.1
1,124,893	+				-0.4
1,124,893	+				-2.0
1,124,893	+				-0.4
1,124,893	+				-1.0
1,124,893	+				+1.2
1,124,893	+				+1.5
1,124,893	+				-0.3
1,124,894	-				+0.7
1,124,894	-				-0.8
1,124,894	-				-0.7
1,124,894	-				+0.1
1,124,894	-				+1.7