Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS19160

Experiment: Adenine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Adenine (C)
3,843,064	+		ABIE40_RS19145	0.86	+0.3
3,843,064	+		ABIE40_RS19145	0.86	+1.1
3,843,064	+		ABIE40_RS19145	0.86	-1.7
3,843,065	-		ABIE40_RS19145	0.86	+1.8
3,843,108	-				-1.9
3,843,182	+				-0.8
3,843,182	+				-1.6
3,843,182	+				-0.7
3,843,215	+				-1.5
3,843,215	+				-0.8
3,843,215	+				-0.0
3,843,216	-				-0.9
3,843,216	-				-0.0
3,843,216	-				-0.2
3,843,216	-				+0.8
3,843,216	-				+0.1
3,843,216	-				-1.5
3,843,216	-				-0.8
3,843,216	-				-0.6
3,843,216	-				+0.8
3,843,216	-				-0.9
3,843,256	+				+0.7
3,843,257	-				-0.5
3,843,257	-				-2.6
3,843,303	-				-0.5
3,843,499	-		ABIE40_RS19150	0.86	-0.4
3,843,577	+				+0.7
3,843,579	+				+1.8
3,843,745	+		ABIE40_RS19155	0.36	-0.0
3,843,745	+		ABIE40_RS19155	0.36	-0.8
3,843,745	+		ABIE40_RS19155	0.36	-1.3
3,843,745	+		ABIE40_RS19155	0.36	+1.1
3,843,745	+		ABIE40_RS19155	0.36	+0.0
3,843,745	+		ABIE40_RS19155	0.36	-0.4
3,843,745	+		ABIE40_RS19155	0.36	-0.2
3,843,745	+		ABIE40_RS19155	0.36	+2.6
3,843,746	-		ABIE40_RS19155	0.36	-0.0
3,843,746	-		ABIE40_RS19155	0.36	+0.2
3,843,746	-		ABIE40_RS19155	0.36	-0.1
3,843,746	-		ABIE40_RS19155	0.36	-1.2
3,843,746	-		ABIE40_RS19155	0.36	+0.5
3,843,746	-		ABIE40_RS19155	0.36	+1.0
3,843,892	+		ABIE40_RS19155	0.69	+0.6
3,843,893	-		ABIE40_RS19155	0.69	+0.1
3,843,893	-		ABIE40_RS19155	0.69	+0.3
3,843,893	-		ABIE40_RS19155	0.69	+1.0
3,843,893	-		ABIE40_RS19155	0.69	+0.0
3,843,979	+		ABIE40_RS19155	0.89	-0.0
3,843,980	-		ABIE40_RS19155	0.89	+0.9
3,844,003	-				+0.9
3,844,003	-				-1.0
3,844,004	+				+0.2
3,844,004	+				+0.3
3,844,004	+				-1.7
3,844,005	-				+1.1
3,844,005	-				-0.2
3,844,131	+				-0.6
3,844,132	-				-0.0
3,844,331	+		ABIE40_RS19160	0.14	+0.0
3,844,331	+		ABIE40_RS19160	0.14	-0.7
3,844,331	+		ABIE40_RS19160	0.14	-1.8
3,844,331	+		ABIE40_RS19160	0.14	+0.2
3,844,331	+		ABIE40_RS19160	0.14	-0.3
3,844,331	+		ABIE40_RS19160	0.14	-0.5
3,844,331	+		ABIE40_RS19160	0.14	-0.6
3,844,331	+		ABIE40_RS19160	0.14	+0.7
3,844,332	-		ABIE40_RS19160	0.14	-0.1
3,844,332	-		ABIE40_RS19160	0.14	+0.0
3,844,332	-		ABIE40_RS19160	0.14	-0.6
3,844,337	+		ABIE40_RS19160	0.14	+0.2
3,844,337	+		ABIE40_RS19160	0.14	+0.3
3,844,337	+		ABIE40_RS19160	0.14	+0.2
3,844,337	+		ABIE40_RS19160	0.14	-0.8
3,844,337	+		ABIE40_RS19160	0.14	+1.4
3,844,337	+		ABIE40_RS19160	0.14	-1.2
3,844,337	+		ABIE40_RS19160	0.14	-0.8
3,844,337	+		ABIE40_RS19160	0.14	+0.5
3,844,337	+		ABIE40_RS19160	0.14	-0.8
3,844,337	+		ABIE40_RS19160	0.14	+0.1
3,844,338	-		ABIE40_RS19160	0.14	+0.3
3,844,338	-		ABIE40_RS19160	0.14	+0.8
3,844,338	-		ABIE40_RS19160	0.14	-0.3
3,844,338	-		ABIE40_RS19160	0.14	+0.4
3,844,338	-		ABIE40_RS19160	0.14	-0.6
3,844,338	-		ABIE40_RS19160	0.14	+1.2
3,844,487	+		ABIE40_RS19160	0.22	-1.1
3,844,488	-		ABIE40_RS19160	0.22	+0.5
3,844,488	-		ABIE40_RS19160	0.22	-0.1
3,844,488	-		ABIE40_RS19160	0.22	-1.2
3,844,488	-		ABIE40_RS19160	0.22	+0.8
3,844,488	-		ABIE40_RS19160	0.22	-1.3
3,844,490	+		ABIE40_RS19160	0.22	-2.2
3,844,490	+		ABIE40_RS19160	0.22	-0.2
3,844,490	+		ABIE40_RS19160	0.22	+0.8
3,844,491	-		ABIE40_RS19160	0.22	-1.1
3,844,491	-		ABIE40_RS19160	0.22	-0.1
3,844,491	-		ABIE40_RS19160	0.22	-2.0
3,844,491	-		ABIE40_RS19160	0.22	+0.0
3,844,529	+		ABIE40_RS19160	0.24	+0.0
3,844,529	+		ABIE40_RS19160	0.24	+0.4
3,844,529	+		ABIE40_RS19160	0.24	+0.2
3,844,530	-		ABIE40_RS19160	0.24	+1.1
3,844,530	-		ABIE40_RS19160	0.24	-0.7
3,844,530	-		ABIE40_RS19160	0.24	-0.2
3,844,530	-		ABIE40_RS19160	0.24	-2.3
3,844,542	-		ABIE40_RS19160	0.25	+0.1
3,844,542	-		ABIE40_RS19160	0.25	+1.0
3,844,542	-		ABIE40_RS19160	0.25	+0.7
3,844,553	+		ABIE40_RS19160	0.25	+0.9
3,844,553	+		ABIE40_RS19160	0.25	-0.5
3,844,553	+		ABIE40_RS19160	0.25	+0.3
3,844,553	+		ABIE40_RS19160	0.25	-1.8
3,844,554	-		ABIE40_RS19160	0.25	-1.5
3,844,583	+		ABIE40_RS19160	0.27	-0.3
3,844,584	-		ABIE40_RS19160	0.27	+1.0
3,844,699	+		ABIE40_RS19160	0.33	+1.0
3,844,820	+		ABIE40_RS19160	0.39	-1.4
3,844,823	+		ABIE40_RS19160	0.39	-0.9
3,844,823	+		ABIE40_RS19160	0.39	+0.2
3,844,824	-		ABIE40_RS19160	0.39	+1.0
3,844,824	-		ABIE40_RS19160	0.39	+0.1
3,844,824	-		ABIE40_RS19160	0.39	-1.8
3,844,824	-		ABIE40_RS19160	0.39	-0.0
3,844,952	+		ABIE40_RS19160	0.46	+0.0
3,844,953	-		ABIE40_RS19160	0.46	-1.0
3,845,064	-		ABIE40_RS19160	0.51	-1.4
3,845,064	-		ABIE40_RS19160	0.51	-1.7
3,845,070	+		ABIE40_RS19160	0.52	-0.7
3,845,070	+		ABIE40_RS19160	0.52	-0.3
3,845,070	+		ABIE40_RS19160	0.52	+0.9
3,845,071	-		ABIE40_RS19160	0.52	+0.1
3,845,071	-		ABIE40_RS19160	0.52	-0.5
3,845,071	-		ABIE40_RS19160	0.52	-0.3
3,845,072	+		ABIE40_RS19160	0.52	+0.1
3,845,072	+		ABIE40_RS19160	0.52	+0.2
3,845,072	+		ABIE40_RS19160	0.52	-0.0
3,845,072	+		ABIE40_RS19160	0.52	-1.6
3,845,072	+		ABIE40_RS19160	0.52	-1.0
3,845,072	+		ABIE40_RS19160	0.52	-0.7
3,845,072	+		ABIE40_RS19160	0.52	-2.0
3,845,072	+		ABIE40_RS19160	0.52	-0.5
3,845,072	+		ABIE40_RS19160	0.52	-0.2
3,845,073	-		ABIE40_RS19160	0.52	-1.1
3,845,073	-		ABIE40_RS19160	0.52	+0.6
3,845,073	-		ABIE40_RS19160	0.52	-1.8
3,845,073	-		ABIE40_RS19160	0.52	+0.9
3,845,073	-		ABIE40_RS19160	0.52	-0.1
3,845,073	-		ABIE40_RS19160	0.52	-0.6
3,845,114	+		ABIE40_RS19160	0.54	+0.4
3,845,114	+		ABIE40_RS19160	0.54	-0.1
3,845,114	+		ABIE40_RS19160	0.54	+0.9
3,845,114	+		ABIE40_RS19160	0.54	-1.5
3,845,114	+		ABIE40_RS19160	0.54	-0.5
3,845,114	+		ABIE40_RS19160	0.54	+0.0
3,845,114	+		ABIE40_RS19160	0.54	+0.3
3,845,114	+		ABIE40_RS19160	0.54	+0.3
3,845,114	+		ABIE40_RS19160	0.54	-0.2
3,845,114	+		ABIE40_RS19160	0.54	-1.1
3,845,114	+		ABIE40_RS19160	0.54	+1.5
3,845,114	+		ABIE40_RS19160	0.54	-0.9
3,845,114	+		ABIE40_RS19160	0.54	-0.3
3,845,115	-		ABIE40_RS19160	0.54	-0.0
3,845,115	-		ABIE40_RS19160	0.54	-0.6
3,845,115	-		ABIE40_RS19160	0.54	-0.9
3,845,115	-		ABIE40_RS19160	0.54	-0.4
3,845,115	-		ABIE40_RS19160	0.54	-2.6
3,845,115	-		ABIE40_RS19160	0.54	-0.4
3,845,115	-		ABIE40_RS19160	0.54	-0.8
3,845,119	-		ABIE40_RS19160	0.54	+0.6
3,845,133	-		ABIE40_RS19160	0.55	+0.1
3,845,133	-		ABIE40_RS19160	0.55	+0.3
3,845,144	+		ABIE40_RS19160	0.55	+2.6
3,845,144	+		ABIE40_RS19160	0.55	+0.1
3,845,144	+		ABIE40_RS19160	0.55	+0.2
3,845,144	+		ABIE40_RS19160	0.55	-0.7
3,845,144	+		ABIE40_RS19160	0.55	-1.4
3,845,144	+		ABIE40_RS19160	0.55	-1.9
3,845,145	-		ABIE40_RS19160	0.55	-0.4
3,845,145	-		ABIE40_RS19160	0.55	+0.7
3,845,145	-		ABIE40_RS19160	0.55	+0.1
3,845,145	-		ABIE40_RS19160	0.55	-0.6
3,845,145	-		ABIE40_RS19160	0.55	-0.6
3,845,145	-		ABIE40_RS19160	0.55	+0.7
3,845,145	-		ABIE40_RS19160	0.55	+1.1
3,845,145	-		ABIE40_RS19160	0.55	+0.1
3,845,145	-		ABIE40_RS19160	0.55	-0.1
3,845,145	-		ABIE40_RS19160	0.55	-0.3
3,845,145	-		ABIE40_RS19160	0.55	-0.8
3,845,145	-		ABIE40_RS19160	0.55	-0.6
3,845,145	-		ABIE40_RS19160	0.55	+0.9
3,845,145	-		ABIE40_RS19160	0.55	-0.9
3,845,157	+		ABIE40_RS19160	0.56	-0.0
3,845,157	+		ABIE40_RS19160	0.56	+2.6
3,845,157	+		ABIE40_RS19160	0.56	-0.0
3,845,228	+		ABIE40_RS19160	0.60	+0.4
3,845,228	+		ABIE40_RS19160	0.60	-0.3
3,845,228	+		ABIE40_RS19160	0.60	+0.0
3,845,229	-		ABIE40_RS19160	0.60	-1.2
3,845,229	-		ABIE40_RS19160	0.60	-0.0
3,845,307	-		ABIE40_RS19160	0.64	-0.7
3,845,400	+		ABIE40_RS19160	0.69	+0.3
3,845,401	-		ABIE40_RS19160	0.69	+0.2
3,845,419	-		ABIE40_RS19160	0.69	-0.4
3,845,500	-		ABIE40_RS19160	0.74	-0.6
3,845,500	-		ABIE40_RS19160	0.74	-0.0
3,845,609	+		ABIE40_RS19160	0.79	-1.3
3,845,609	+		ABIE40_RS19160	0.79	+0.9
3,845,609	+		ABIE40_RS19160	0.79	-1.6
3,845,610	-		ABIE40_RS19160	0.79	+1.1
3,845,610	-		ABIE40_RS19160	0.79	+1.2
3,845,610	-		ABIE40_RS19160	0.79	-1.2
3,845,610	-		ABIE40_RS19160	0.79	-1.1
3,845,610	-		ABIE40_RS19160	0.79	+0.3
3,845,610	-		ABIE40_RS19160	0.79	-0.0
3,845,610	-		ABIE40_RS19160	0.79	+0.2
3,845,610	-		ABIE40_RS19160	0.79	-1.1
3,845,681	+		ABIE40_RS19160	0.83	+0.1
3,845,691	+		ABIE40_RS19160	0.83	+0.2
3,845,692	-		ABIE40_RS19160	0.83	+0.3
3,845,693	+		ABIE40_RS19160	0.83	-0.3
3,845,693	+		ABIE40_RS19160	0.83	+0.4
3,845,693	+		ABIE40_RS19160	0.83	-0.1
3,845,693	+		ABIE40_RS19160	0.83	-3.2
3,845,693	+		ABIE40_RS19160	0.83	+0.5
3,845,694	-		ABIE40_RS19160	0.84	-0.5
3,845,694	-		ABIE40_RS19160	0.84	-1.1
3,845,714	+		ABIE40_RS19160	0.85	+1.1
3,845,715	-		ABIE40_RS19160	0.85	-0.1
3,845,784	+		ABIE40_RS19160	0.88	-1.2
3,845,784	+		ABIE40_RS19160	0.88	-0.4
3,845,785	-		ABIE40_RS19160	0.88	-1.8
3,845,786	+		ABIE40_RS19160	0.88	+1.3
3,845,786	+		ABIE40_RS19160	0.88	-0.3
3,845,786	+		ABIE40_RS19160	0.88	-0.5
3,845,786	+		ABIE40_RS19160	0.88	-0.3
3,845,787	-		ABIE40_RS19160	0.88	-0.8
3,845,862	+				-0.4
3,845,862	+				+0.5
3,845,862	+				+1.0
3,845,862	+				-0.2
3,845,863	-				+2.1
3,845,863	-				+0.3
3,845,863	-				-0.2
3,845,864	+				+0.5
3,845,865	-				-0.6
3,845,865	-				-1.5
3,845,936	+				-0.7
3,845,949	-				+0.5
3,845,949	-				+0.5
3,845,999	+				-0.1
3,846,000	-				-0.5
3,846,088	+				+0.6
3,846,088	+				+0.5
3,846,088	+				-0.1
3,846,088	+				-1.0
3,846,088	+				-1.1
3,846,089	-				-0.5
3,846,089	-				-0.4
3,846,178	+				-1.0
3,846,845	+		ABIE40_RS19165	0.85	-0.4
3,846,845	+		ABIE40_RS19165	0.85	+0.5
3,846,845	+		ABIE40_RS19165	0.85	+2.6
3,846,845	+		ABIE40_RS19165	0.85	-0.1
3,846,845	+		ABIE40_RS19165	0.85	-1.3
3,846,846	-		ABIE40_RS19165	0.85	-0.1
3,846,846	-		ABIE40_RS19165	0.85	+0.9
3,847,001	+				-1.5
3,847,001	+				-0.8
3,847,002	-				-0.3