Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS15355

Experiment: Adenine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Adenine (C)
3,029,608	+		ABIE40_RS15345	0.89	-0.1
3,029,608	+		ABIE40_RS15345	0.89	-3.7
3,029,609	-		ABIE40_RS15345	0.89	-2.5
3,029,610	+		ABIE40_RS15345	0.89	-2.6
3,029,610	+		ABIE40_RS15345	0.89	-2.6
3,029,610	+		ABIE40_RS15345	0.89	-3.6
3,029,610	+		ABIE40_RS15345	0.89	-2.9
3,029,610	+		ABIE40_RS15345	0.89	-1.7
3,029,611	-		ABIE40_RS15345	0.89	-1.8
3,029,611	-		ABIE40_RS15345	0.89	-1.3
3,029,705	-				+0.9
3,029,778	-				-0.6
3,029,778	-				+1.1
3,029,792	+				-0.2
3,029,792	+				+0.5
3,029,793	-				-0.1
3,029,911	+		ABIE40_RS15350	0.14	+0.7
3,029,912	-		ABIE40_RS15350	0.14	-0.4
3,029,912	-		ABIE40_RS15350	0.14	+1.0
3,029,968	-		ABIE40_RS15350	0.23	-3.1
3,029,968	-		ABIE40_RS15350	0.23	+0.4
3,029,968	-		ABIE40_RS15350	0.23	-0.1
3,030,145	+		ABIE40_RS15350	0.53	-0.1
3,030,145	+		ABIE40_RS15350	0.53	+0.2
3,030,145	+		ABIE40_RS15350	0.53	-0.9
3,030,145	+		ABIE40_RS15350	0.53	-2.6
3,030,146	-		ABIE40_RS15350	0.53	-0.9
3,030,146	-		ABIE40_RS15350	0.53	+0.4
3,030,146	-		ABIE40_RS15350	0.53	+0.7
3,030,147	+		ABIE40_RS15350	0.53	+0.4
3,030,147	+		ABIE40_RS15350	0.53	+1.0
3,030,148	-		ABIE40_RS15350	0.54	+0.4
3,030,148	-		ABIE40_RS15350	0.54	+1.3
3,030,148	-		ABIE40_RS15350	0.54	-0.7
3,030,148	-		ABIE40_RS15350	0.54	+1.4
3,030,148	-		ABIE40_RS15350	0.54	-0.4
3,030,265	+		ABIE40_RS15350	0.73	-1.6
3,030,266	-		ABIE40_RS15350	0.73	-0.0
3,030,266	-		ABIE40_RS15350	0.73	-1.9
3,030,266	-		ABIE40_RS15350	0.73	+1.7
3,030,266	-		ABIE40_RS15350	0.73	+0.9
3,030,417	+				+0.8
3,030,417	+				-0.1
3,030,417	+				-0.0
3,030,428	-				+0.1
3,030,446	+				-2.1
3,030,447	-				+0.8
3,030,504	+				+0.6
3,030,549	+				-1.1
3,030,549	+				-0.5
3,030,550	-				+1.7
3,030,550	-				+1.4
3,030,550	-				+0.1
3,030,550	-				-0.6
3,030,581	-				+0.2
3,030,738	+		ABIE40_RS15355	0.13	+0.1
3,030,738	+		ABIE40_RS15355	0.13	+0.1
3,030,738	+		ABIE40_RS15355	0.13	-2.6
3,030,738	+		ABIE40_RS15355	0.13	-0.7
3,030,738	+		ABIE40_RS15355	0.13	+1.2
3,030,739	-		ABIE40_RS15355	0.13	+1.4
3,030,739	-		ABIE40_RS15355	0.13	+0.5
3,030,739	-		ABIE40_RS15355	0.13	-0.1
3,030,739	-		ABIE40_RS15355	0.13	-0.1
3,030,739	-		ABIE40_RS15355	0.13	-1.1
3,030,746	+		ABIE40_RS15355	0.14	+1.4
3,030,747	-		ABIE40_RS15355	0.14	+0.2
3,030,777	+		ABIE40_RS15355	0.17	+0.3
3,030,777	+		ABIE40_RS15355	0.17	-2.5
3,030,778	-		ABIE40_RS15355	0.17	+1.0
3,030,778	-		ABIE40_RS15355	0.17	-2.6
3,030,850	+		ABIE40_RS15355	0.22	+0.1
3,030,850	+		ABIE40_RS15355	0.22	+0.0
3,030,850	+		ABIE40_RS15355	0.22	+1.6
3,030,851	-		ABIE40_RS15355	0.23	+0.1
3,030,870	+		ABIE40_RS15355	0.24	-0.1
3,030,870	+		ABIE40_RS15355	0.24	+0.7
3,030,870	+		ABIE40_RS15355	0.24	+0.7
3,030,871	-		ABIE40_RS15355	0.24	+1.1
3,030,871	-		ABIE40_RS15355	0.24	-0.4
3,030,871	-		ABIE40_RS15355	0.24	+0.6
3,030,871	-		ABIE40_RS15355	0.24	-0.5
3,030,891	+		ABIE40_RS15355	0.26	-0.1
3,030,892	-		ABIE40_RS15355	0.26	-0.3
3,030,892	-		ABIE40_RS15355	0.26	-0.0
3,031,014	+		ABIE40_RS15355	0.36	+2.2
3,031,014	+		ABIE40_RS15355	0.36	-0.1
3,031,152	+		ABIE40_RS15355	0.47	+1.4
3,031,152	+		ABIE40_RS15355	0.47	+0.7
3,031,152	+		ABIE40_RS15355	0.47	+0.1
3,031,153	-		ABIE40_RS15355	0.47	-0.6
3,031,153	-		ABIE40_RS15355	0.47	-1.1
3,031,153	-		ABIE40_RS15355	0.47	+0.3
3,031,157	+		ABIE40_RS15355	0.48	+0.2
3,031,157	+		ABIE40_RS15355	0.48	-1.1
3,031,157	+		ABIE40_RS15355	0.48	+0.6
3,031,158	-		ABIE40_RS15355	0.48	+0.1
3,031,158	-		ABIE40_RS15355	0.48	+0.0
3,031,204	+		ABIE40_RS15355	0.52	+0.9
3,031,205	-		ABIE40_RS15355	0.52	-1.1
3,031,225	-		ABIE40_RS15355	0.53	+0.0
3,031,225	-		ABIE40_RS15355	0.53	+0.4
3,031,225	-		ABIE40_RS15355	0.53	+1.2
3,031,225	-		ABIE40_RS15355	0.53	+0.2
3,031,344	+		ABIE40_RS15355	0.63	+1.0
3,031,344	+		ABIE40_RS15355	0.63	+1.1
3,031,344	+		ABIE40_RS15355	0.63	+0.7
3,031,345	-		ABIE40_RS15355	0.63	+0.5
3,031,458	+		ABIE40_RS15355	0.72	+0.1
3,031,458	+		ABIE40_RS15355	0.72	+0.1
3,031,458	+		ABIE40_RS15355	0.72	-0.6
3,031,458	+		ABIE40_RS15355	0.72	-1.6
3,031,458	+		ABIE40_RS15355	0.72	+1.4
3,031,458	+		ABIE40_RS15355	0.72	+0.9
3,031,458	+		ABIE40_RS15355	0.72	-0.2
3,031,458	+		ABIE40_RS15355	0.72	+1.0
3,031,459	-		ABIE40_RS15355	0.72	+1.0
3,031,459	-		ABIE40_RS15355	0.72	+0.2
3,031,459	-		ABIE40_RS15355	0.72	+0.8
3,031,459	-		ABIE40_RS15355	0.72	-1.7
3,031,459	-		ABIE40_RS15355	0.72	+1.4
3,031,459	-		ABIE40_RS15355	0.72	-0.6
3,031,459	-		ABIE40_RS15355	0.72	+1.0
3,031,497	+		ABIE40_RS15355	0.76	+0.3
3,031,791	+				+0.6
3,031,792	-				+1.4
3,031,833	+				+0.8
3,031,834	-				+0.4
3,031,922	+				-0.2
3,031,922	+				+0.0
3,031,923	-				+1.4
3,031,923	-				-0.1
3,031,923	-				-0.9
3,031,923	-				-0.1
3,031,923	-				-0.9
3,031,943	+				+1.0
3,031,985	+				+0.4
3,031,985	+				+1.0
3,031,986	-				-0.6
3,031,986	-				-1.2
3,032,069	+				+0.4
3,032,069	+				+1.0
3,032,069	+				-0.4
3,032,069	+				+1.7
3,032,069	+				+0.5
3,032,069	+				+0.9
3,032,070	-				+2.4
3,032,070	-				+1.7
3,032,070	-				-0.1
3,032,070	-				-1.5
3,032,070	-				-0.5
3,032,070	-				+0.8
3,032,070	-				+0.2
3,032,070	-				-0.1
3,032,070	-				-0.7
3,032,381	+		ABIE40_RS15360	0.17	-2.8
3,032,382	-		ABIE40_RS15360	0.17	-0.2
3,032,408	+		ABIE40_RS15360	0.18	+1.2
3,032,409	-		ABIE40_RS15360	0.18	+0.4
3,032,660	+		ABIE40_RS15360	0.26	-0.6
3,032,661	-		ABIE40_RS15360	0.26	-0.7
3,032,678	+		ABIE40_RS15360	0.27	+1.0
3,032,678	+		ABIE40_RS15360	0.27	+0.2
3,032,678	+		ABIE40_RS15360	0.27	-0.1
3,032,679	-		ABIE40_RS15360	0.27	-0.6
3,032,679	-		ABIE40_RS15360	0.27	+0.9
3,032,679	-		ABIE40_RS15360	0.27	+1.6
3,032,770	+		ABIE40_RS15360	0.30	-0.8
3,032,771	-		ABIE40_RS15360	0.30	+0.4