Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS28960 and ABID97_RS28965 overlap by 4 nucleotides ABID97_RS28965 and ABID97_RS28970 are separated by 147 nucleotides
ABID97_RS28960: ABID97_RS28960 - AMP-binding protein, at 711,310 to 712,962
_RS28960
ABID97_RS28965: ABID97_RS28965 - nitroreductase, at 712,959 to 713,699
_RS28965
ABID97_RS28970: ABID97_RS28970 - AraC family transcriptional regulator, at 713,847 to 714,866
_RS28970
Position (kb) 712
713
714 Strain fitness (log2 ratio) -2
-1
0
1 at 712.283 kb on + strand, within ABID97_RS28960 at 712.338 kb on - strand, within ABID97_RS28960 at 712.394 kb on + strand, within ABID97_RS28960 at 712.395 kb on - strand, within ABID97_RS28960 at 712.395 kb on - strand, within ABID97_RS28960 at 712.534 kb on + strand, within ABID97_RS28960 at 712.946 kb on + strand at 712.946 kb on + strand at 713.212 kb on + strand, within ABID97_RS28965 at 713.413 kb on + strand, within ABID97_RS28965 at 713.413 kb on + strand, within ABID97_RS28965 at 713.414 kb on - strand, within ABID97_RS28965 at 713.414 kb on - strand, within ABID97_RS28965 at 713.414 kb on - strand, within ABID97_RS28965 at 714.034 kb on + strand, within ABID97_RS28970 at 714.035 kb on - strand, within ABID97_RS28970 at 714.035 kb on - strand, within ABID97_RS28970 at 714.083 kb on + strand, within ABID97_RS28970 at 714.083 kb on + strand, within ABID97_RS28970 at 714.619 kb on + strand, within ABID97_RS28970 at 714.620 kb on - strand, within ABID97_RS28970 at 714.620 kb on - strand, within ABID97_RS28970 at 714.620 kb on - strand, within ABID97_RS28970 at 714.620 kb on - strand, within ABID97_RS28970
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 712,283 + ABID97_RS28960 0.59 +0.5 712,338 - ABID97_RS28960 0.62 +0.2 712,394 + ABID97_RS28960 0.66 +0.3 712,395 - ABID97_RS28960 0.66 -0.6 712,395 - ABID97_RS28960 0.66 +0.2 712,534 + ABID97_RS28960 0.74 +0.9 712,946 + +0.1 712,946 + -2.0 713,212 + ABID97_RS28965 0.34 +0.3 713,413 + ABID97_RS28965 0.61 +0.3 713,413 + ABID97_RS28965 0.61 -0.6 713,414 - ABID97_RS28965 0.61 +1.7 713,414 - ABID97_RS28965 0.61 -0.0 713,414 - ABID97_RS28965 0.61 +0.5 714,034 + ABID97_RS28970 0.18 -0.0 714,035 - ABID97_RS28970 0.18 +0.2 714,035 - ABID97_RS28970 0.18 +1.1 714,083 + ABID97_RS28970 0.23 +0.6 714,083 + ABID97_RS28970 0.23 -0.4 714,619 + ABID97_RS28970 0.76 -0.2 714,620 - ABID97_RS28970 0.76 -0.4 714,620 - ABID97_RS28970 0.76 +0.8 714,620 - ABID97_RS28970 0.76 -0.3 714,620 - ABID97_RS28970 0.76 -0.3
Or see this region's nucleotide sequence