Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS26995 and ABID97_RS27000 are separated by 225 nucleotides ABID97_RS27000 and ABID97_RS27005 are separated by 25 nucleotides ABID97_RS27005 and ABID97_RS27010 overlap by 4 nucleotides
ABID97_RS26995: ABID97_RS26995 - Crp/Fnr family transcriptional regulator, at 319,288 to 320,076
_RS26995
ABID97_RS27000: ABID97_RS27000 - DUF2282 domain-containing protein, at 320,302 to 320,589
_RS27000
ABID97_RS27005: ABID97_RS27005 - DUF692 domain-containing protein, at 320,615 to 321,457
_RS27005
ABID97_RS27010: ABID97_RS27010 - DNA-binding domain-containing protein, at 321,454 to 322,242
_RS27010
Position (kb) 320
321 Strain fitness (log2 ratio) -1
0
1 at 319.504 kb on + strand, within ABID97_RS26995 at 319.505 kb on - strand, within ABID97_RS26995 at 319.676 kb on - strand, within ABID97_RS26995 at 319.906 kb on + strand, within ABID97_RS26995 at 319.907 kb on - strand, within ABID97_RS26995 at 319.907 kb on - strand, within ABID97_RS26995 at 320.495 kb on - strand, within ABID97_RS27000 at 320.599 kb on + strand at 320.600 kb on - strand at 320.720 kb on + strand, within ABID97_RS27005 at 320.721 kb on - strand, within ABID97_RS27005 at 320.721 kb on - strand, within ABID97_RS27005
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 319,504 + ABID97_RS26995 0.27 +0.8 319,505 - ABID97_RS26995 0.28 -0.3 319,676 - ABID97_RS26995 0.49 +1.4 319,906 + ABID97_RS26995 0.78 -0.4 319,907 - ABID97_RS26995 0.78 +0.6 319,907 - ABID97_RS26995 0.78 -0.1 320,495 - ABID97_RS27000 0.67 -0.7 320,599 + -0.6 320,600 - +1.3 320,720 + ABID97_RS27005 0.12 -0.0 320,721 - ABID97_RS27005 0.13 -0.4 320,721 - ABID97_RS27005 0.13 +1.5
Or see this region's nucleotide sequence