Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS24240 and ABID97_RS24245 are separated by 13 nucleotides ABID97_RS24245 and ABID97_RS24250 are separated by 110 nucleotides ABID97_RS24250 and ABID97_RS24255 are separated by 139 nucleotides
ABID97_RS24240: ABID97_RS24240 - hypothetical protein, at 5,008,942 to 5,009,958
_RS24240
ABID97_RS24245: ABID97_RS24245 - methyltransferase domain-containing protein, at 5,009,972 to 5,010,673
_RS24245
ABID97_RS24250: ABID97_RS24250 - rhamnan synthesis F family protein, at 5,010,784 to 5,015,271
_RS24250
ABID97_RS24255: ABID97_RS24255 - tetratricopeptide repeat protein, at 5,015,411 to 5,016,559
_RS24255
Position (kb) 5010
5011
5012
5013
5014
5015
5016 Strain fitness (log2 ratio) -1
0
1
2 at 5009.794 kb on + strand, within ABID97_RS24240 at 5009.794 kb on + strand, within ABID97_RS24240 at 5009.794 kb on + strand, within ABID97_RS24240 at 5009.794 kb on + strand, within ABID97_RS24240 at 5009.795 kb on - strand, within ABID97_RS24240 at 5009.795 kb on - strand, within ABID97_RS24240 at 5009.795 kb on - strand, within ABID97_RS24240 at 5009.969 kb on + strand at 5009.970 kb on - strand at 5009.970 kb on - strand at 5010.012 kb on - strand at 5010.350 kb on + strand, within ABID97_RS24245 at 5010.350 kb on + strand, within ABID97_RS24245 at 5010.350 kb on + strand, within ABID97_RS24245 at 5010.350 kb on + strand, within ABID97_RS24245 at 5010.351 kb on - strand, within ABID97_RS24245 at 5010.407 kb on - strand, within ABID97_RS24245 at 5010.479 kb on + strand, within ABID97_RS24245 at 5010.482 kb on + strand, within ABID97_RS24245 at 5010.483 kb on - strand, within ABID97_RS24245 at 5010.507 kb on - strand, within ABID97_RS24245 at 5010.509 kb on + strand, within ABID97_RS24245 at 5010.510 kb on - strand, within ABID97_RS24245 at 5010.719 kb on - strand at 5010.735 kb on + strand at 5010.796 kb on - strand at 5010.829 kb on + strand at 5010.830 kb on - strand at 5010.972 kb on + strand at 5010.973 kb on - strand at 5011.131 kb on + strand at 5011.131 kb on + strand at 5011.132 kb on - strand at 5011.132 kb on - strand at 5011.189 kb on + strand at 5011.190 kb on - strand at 5011.218 kb on + strand at 5011.219 kb on - strand at 5011.480 kb on + strand, within ABID97_RS24250 at 5011.538 kb on - strand, within ABID97_RS24250 at 5011.646 kb on + strand, within ABID97_RS24250 at 5011.647 kb on - strand, within ABID97_RS24250 at 5012.704 kb on + strand, within ABID97_RS24250 at 5012.705 kb on - strand, within ABID97_RS24250 at 5012.705 kb on - strand, within ABID97_RS24250 at 5012.705 kb on - strand, within ABID97_RS24250 at 5012.750 kb on - strand, within ABID97_RS24250 at 5012.933 kb on - strand, within ABID97_RS24250 at 5012.935 kb on + strand, within ABID97_RS24250 at 5012.935 kb on + strand, within ABID97_RS24250 at 5012.935 kb on + strand, within ABID97_RS24250 at 5012.936 kb on - strand, within ABID97_RS24250 at 5012.936 kb on - strand, within ABID97_RS24250 at 5012.980 kb on + strand, within ABID97_RS24250 at 5012.980 kb on + strand, within ABID97_RS24250 at 5012.980 kb on + strand, within ABID97_RS24250 at 5012.981 kb on - strand, within ABID97_RS24250 at 5013.415 kb on + strand, within ABID97_RS24250 at 5013.484 kb on - strand, within ABID97_RS24250 at 5013.490 kb on + strand, within ABID97_RS24250 at 5013.770 kb on + strand, within ABID97_RS24250 at 5013.811 kb on + strand, within ABID97_RS24250 at 5013.812 kb on - strand, within ABID97_RS24250 at 5013.820 kb on + strand, within ABID97_RS24250 at 5013.821 kb on - strand, within ABID97_RS24250 at 5013.821 kb on - strand, within ABID97_RS24250 at 5013.821 kb on - strand, within ABID97_RS24250 at 5013.901 kb on + strand, within ABID97_RS24250 at 5013.901 kb on + strand, within ABID97_RS24250 at 5013.902 kb on - strand, within ABID97_RS24250 at 5014.067 kb on - strand, within ABID97_RS24250 at 5014.186 kb on + strand, within ABID97_RS24250 at 5014.351 kb on + strand, within ABID97_RS24250 at 5014.351 kb on + strand, within ABID97_RS24250 at 5014.351 kb on + strand, within ABID97_RS24250 at 5014.351 kb on + strand, within ABID97_RS24250 at 5014.351 kb on + strand, within ABID97_RS24250 at 5014.351 kb on + strand, within ABID97_RS24250 at 5014.352 kb on - strand, within ABID97_RS24250 at 5014.352 kb on - strand, within ABID97_RS24250 at 5014.352 kb on - strand, within ABID97_RS24250 at 5014.352 kb on - strand, within ABID97_RS24250 at 5014.352 kb on - strand, within ABID97_RS24250 at 5014.352 kb on - strand, within ABID97_RS24250 at 5014.352 kb on - strand, within ABID97_RS24250 at 5014.355 kb on + strand, within ABID97_RS24250 at 5014.355 kb on + strand, within ABID97_RS24250 at 5014.355 kb on + strand, within ABID97_RS24250 at 5014.355 kb on + strand, within ABID97_RS24250 at 5014.355 kb on + strand, within ABID97_RS24250 at 5014.356 kb on - strand, within ABID97_RS24250 at 5014.356 kb on - strand, within ABID97_RS24250 at 5014.356 kb on - strand, within ABID97_RS24250 at 5014.356 kb on - strand, within ABID97_RS24250 at 5014.356 kb on - strand, within ABID97_RS24250 at 5014.356 kb on - strand, within ABID97_RS24250 at 5014.417 kb on + strand, within ABID97_RS24250 at 5014.417 kb on + strand, within ABID97_RS24250 at 5014.579 kb on + strand, within ABID97_RS24250 at 5014.579 kb on + strand, within ABID97_RS24250 at 5014.579 kb on + strand, within ABID97_RS24250 at 5014.579 kb on + strand, within ABID97_RS24250 at 5014.580 kb on - strand, within ABID97_RS24250 at 5014.690 kb on + strand, within ABID97_RS24250 at 5014.690 kb on + strand, within ABID97_RS24250 at 5014.691 kb on - strand, within ABID97_RS24250 at 5014.798 kb on + strand, within ABID97_RS24250 at 5014.799 kb on - strand, within ABID97_RS24250 at 5014.799 kb on - strand, within ABID97_RS24250 at 5014.799 kb on - strand, within ABID97_RS24250 at 5014.799 kb on - strand, within ABID97_RS24250 at 5014.799 kb on - strand, within ABID97_RS24250 at 5014.863 kb on + strand at 5014.863 kb on + strand at 5014.863 kb on + strand at 5014.864 kb on - strand at 5015.167 kb on + strand at 5015.167 kb on + strand at 5015.167 kb on + strand at 5015.241 kb on - strand at 5015.291 kb on + strand at 5015.291 kb on + strand at 5015.292 kb on - strand at 5015.367 kb on + strand at 5015.367 kb on + strand at 5015.723 kb on + strand, within ABID97_RS24255 at 5015.744 kb on + strand, within ABID97_RS24255 at 5015.745 kb on - strand, within ABID97_RS24255 at 5015.745 kb on - strand, within ABID97_RS24255 at 5015.813 kb on + strand, within ABID97_RS24255 at 5015.813 kb on + strand, within ABID97_RS24255 at 5015.813 kb on + strand, within ABID97_RS24255 at 5015.846 kb on + strand, within ABID97_RS24255 at 5015.847 kb on - strand, within ABID97_RS24255 at 5015.847 kb on - strand, within ABID97_RS24255 at 5015.870 kb on + strand, within ABID97_RS24255 at 5015.870 kb on + strand, within ABID97_RS24255 at 5015.870 kb on + strand, within ABID97_RS24255
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 5,009,794 + ABID97_RS24240 0.84 -0.0 5,009,794 + ABID97_RS24240 0.84 +0.6 5,009,794 + ABID97_RS24240 0.84 -0.1 5,009,794 + ABID97_RS24240 0.84 +0.2 5,009,795 - ABID97_RS24240 0.84 +1.4 5,009,795 - ABID97_RS24240 0.84 +0.1 5,009,795 - ABID97_RS24240 0.84 +0.9 5,009,969 + +0.2 5,009,970 - -0.5 5,009,970 - +2.6 5,010,012 - +2.2 5,010,350 + ABID97_RS24245 0.54 +0.5 5,010,350 + ABID97_RS24245 0.54 -0.2 5,010,350 + ABID97_RS24245 0.54 +1.0 5,010,350 + ABID97_RS24245 0.54 +0.5 5,010,351 - ABID97_RS24245 0.54 -0.1 5,010,407 - ABID97_RS24245 0.62 +0.3 5,010,479 + ABID97_RS24245 0.72 +1.2 5,010,482 + ABID97_RS24245 0.73 +0.8 5,010,483 - ABID97_RS24245 0.73 +0.8 5,010,507 - ABID97_RS24245 0.76 -0.1 5,010,509 + ABID97_RS24245 0.76 +0.2 5,010,510 - ABID97_RS24245 0.77 +0.1 5,010,719 - +0.2 5,010,735 + +0.2 5,010,796 - +0.5 5,010,829 + +0.4 5,010,830 - -0.1 5,010,972 + +0.4 5,010,973 - +0.1 5,011,131 + -0.1 5,011,131 + +0.2 5,011,132 - +0.9 5,011,132 - -0.3 5,011,189 + +0.3 5,011,190 - +0.5 5,011,218 + +0.1 5,011,219 - -0.6 5,011,480 + ABID97_RS24250 0.16 +1.3 5,011,538 - ABID97_RS24250 0.17 -0.3 5,011,646 + ABID97_RS24250 0.19 +0.5 5,011,647 - ABID97_RS24250 0.19 +0.4 5,012,704 + ABID97_RS24250 0.43 +1.1 5,012,705 - ABID97_RS24250 0.43 +0.0 5,012,705 - ABID97_RS24250 0.43 +0.0 5,012,705 - ABID97_RS24250 0.43 -0.1 5,012,750 - ABID97_RS24250 0.44 +0.1 5,012,933 - ABID97_RS24250 0.48 +0.2 5,012,935 + ABID97_RS24250 0.48 +0.0 5,012,935 + ABID97_RS24250 0.48 +0.4 5,012,935 + ABID97_RS24250 0.48 +0.7 5,012,936 - ABID97_RS24250 0.48 +0.2 5,012,936 - ABID97_RS24250 0.48 +0.2 5,012,980 + ABID97_RS24250 0.49 -0.9 5,012,980 + ABID97_RS24250 0.49 +0.3 5,012,980 + ABID97_RS24250 0.49 +0.4 5,012,981 - ABID97_RS24250 0.49 +0.3 5,013,415 + ABID97_RS24250 0.59 -0.3 5,013,484 - ABID97_RS24250 0.60 +0.0 5,013,490 + ABID97_RS24250 0.60 +0.5 5,013,770 + ABID97_RS24250 0.67 +0.2 5,013,811 + ABID97_RS24250 0.67 -0.9 5,013,812 - ABID97_RS24250 0.67 +0.5 5,013,820 + ABID97_RS24250 0.68 -0.1 5,013,821 - ABID97_RS24250 0.68 +2.1 5,013,821 - ABID97_RS24250 0.68 +2.1 5,013,821 - ABID97_RS24250 0.68 -0.3 5,013,901 + ABID97_RS24250 0.69 +0.2 5,013,901 + ABID97_RS24250 0.69 +1.3 5,013,902 - ABID97_RS24250 0.69 -0.1 5,014,067 - ABID97_RS24250 0.73 -0.0 5,014,186 + ABID97_RS24250 0.76 +0.0 5,014,351 + ABID97_RS24250 0.79 +0.3 5,014,351 + ABID97_RS24250 0.79 -0.1 5,014,351 + ABID97_RS24250 0.79 -0.2 5,014,351 + ABID97_RS24250 0.79 -0.9 5,014,351 + ABID97_RS24250 0.79 +0.0 5,014,351 + ABID97_RS24250 0.79 -0.2 5,014,352 - ABID97_RS24250 0.80 -0.5 5,014,352 - ABID97_RS24250 0.80 -0.5 5,014,352 - ABID97_RS24250 0.80 -0.4 5,014,352 - ABID97_RS24250 0.80 -0.2 5,014,352 - ABID97_RS24250 0.80 +0.1 5,014,352 - ABID97_RS24250 0.80 +0.1 5,014,352 - ABID97_RS24250 0.80 +0.2 5,014,355 + ABID97_RS24250 0.80 +0.1 5,014,355 + ABID97_RS24250 0.80 +0.7 5,014,355 + ABID97_RS24250 0.80 -0.2 5,014,355 + ABID97_RS24250 0.80 +0.2 5,014,355 + ABID97_RS24250 0.80 -0.2 5,014,356 - ABID97_RS24250 0.80 +0.2 5,014,356 - ABID97_RS24250 0.80 -0.2 5,014,356 - ABID97_RS24250 0.80 +0.1 5,014,356 - ABID97_RS24250 0.80 +0.1 5,014,356 - ABID97_RS24250 0.80 +1.3 5,014,356 - ABID97_RS24250 0.80 -0.1 5,014,417 + ABID97_RS24250 0.81 +0.3 5,014,417 + ABID97_RS24250 0.81 -1.3 5,014,579 + ABID97_RS24250 0.85 +0.0 5,014,579 + ABID97_RS24250 0.85 +0.9 5,014,579 + ABID97_RS24250 0.85 +1.1 5,014,579 + ABID97_RS24250 0.85 -0.2 5,014,580 - ABID97_RS24250 0.85 -1.0 5,014,690 + ABID97_RS24250 0.87 -0.1 5,014,690 + ABID97_RS24250 0.87 +0.2 5,014,691 - ABID97_RS24250 0.87 +0.9 5,014,798 + ABID97_RS24250 0.89 -0.2 5,014,799 - ABID97_RS24250 0.89 +0.1 5,014,799 - ABID97_RS24250 0.89 -0.3 5,014,799 - ABID97_RS24250 0.89 +0.3 5,014,799 - ABID97_RS24250 0.89 -0.0 5,014,799 - ABID97_RS24250 0.89 +0.6 5,014,863 + +0.1 5,014,863 + +0.0 5,014,863 + +0.1 5,014,864 - +0.2 5,015,167 + +0.5 5,015,167 + -0.2 5,015,167 + -0.6 5,015,241 - +0.2 5,015,291 + -0.1 5,015,291 + +0.2 5,015,292 - +0.2 5,015,367 + +0.6 5,015,367 + -0.2 5,015,723 + ABID97_RS24255 0.27 +0.1 5,015,744 + ABID97_RS24255 0.29 +0.2 5,015,745 - ABID97_RS24255 0.29 -0.5 5,015,745 - ABID97_RS24255 0.29 +0.2 5,015,813 + ABID97_RS24255 0.35 +0.5 5,015,813 + ABID97_RS24255 0.35 -0.4 5,015,813 + ABID97_RS24255 0.35 +0.0 5,015,846 + ABID97_RS24255 0.38 -0.2 5,015,847 - ABID97_RS24255 0.38 -0.1 5,015,847 - ABID97_RS24255 0.38 +0.8 5,015,870 + ABID97_RS24255 0.40 -0.3 5,015,870 + ABID97_RS24255 0.40 +0.4 5,015,870 + ABID97_RS24255 0.40 -0.4
Or see this region's nucleotide sequence