Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS14245 and ABID97_RS14250 are separated by 163 nucleotides ABID97_RS14250 and ABID97_RS14255 are separated by 53 nucleotides ABID97_RS14255 and ABID97_RS14260 are separated by 74 nucleotides
ABID97_RS14245: ABID97_RS14245 - ribosome biogenesis GTPase Der, at 2,963,410 to 2,964,753
_RS14245
ABID97_RS14250: ABID97_RS14250 - RNA chaperone Hfq, at 2,964,917 to 2,965,162
_RS14250
ABID97_RS14255: ABID97_RS14255 - GTPase HflX, at 2,965,216 to 2,966,385
_RS14255
ABID97_RS14260: ABID97_RS14260 - FtsH protease activity modulator HflK, at 2,966,460 to 2,967,833
_RS14260
Position (kb)
2965
2966
2967 Strain fitness (log2 ratio)
-2
-1
0
1 at 2964.785 kb on + strand at 2964.785 kb on + strand at 2964.786 kb on - strand at 2964.786 kb on - strand at 2965.520 kb on - strand, within ABID97_RS14255 at 2965.609 kb on + strand, within ABID97_RS14255 at 2965.609 kb on + strand, within ABID97_RS14255 at 2965.609 kb on + strand, within ABID97_RS14255 at 2965.609 kb on + strand, within ABID97_RS14255 at 2965.835 kb on - strand, within ABID97_RS14255 at 2965.835 kb on - strand, within ABID97_RS14255 at 2965.939 kb on + strand, within ABID97_RS14255 at 2965.940 kb on - strand, within ABID97_RS14255 at 2966.234 kb on + strand, within ABID97_RS14255 at 2966.256 kb on + strand, within ABID97_RS14255 at 2966.257 kb on - strand, within ABID97_RS14255 at 2966.889 kb on + strand, within ABID97_RS14260 at 2966.889 kb on + strand, within ABID97_RS14260 at 2966.890 kb on - strand, within ABID97_RS14260 at 2966.890 kb on - strand, within ABID97_RS14260
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 2,964,785 + -0.1 2,964,785 + -1.2 2,964,786 - -1.4 2,964,786 - -0.7 2,965,520 - ABID97_RS14255 0.26 +0.5 2,965,609 + ABID97_RS14255 0.34 -1.1 2,965,609 + ABID97_RS14255 0.34 -1.2 2,965,609 + ABID97_RS14255 0.34 +0.0 2,965,609 + ABID97_RS14255 0.34 -1.9 2,965,835 - ABID97_RS14255 0.53 -1.3 2,965,835 - ABID97_RS14255 0.53 -1.6 2,965,939 + ABID97_RS14255 0.62 -1.1 2,965,940 - ABID97_RS14255 0.62 -0.7 2,966,234 + ABID97_RS14255 0.87 -2.1 2,966,256 + ABID97_RS14255 0.89 -2.1 2,966,257 - ABID97_RS14255 0.89 -0.1 2,966,889 + ABID97_RS14260 0.31 -0.4 2,966,889 + ABID97_RS14260 0.31 -0.8 2,966,890 - ABID97_RS14260 0.31 -0.9 2,966,890 - ABID97_RS14260 0.31 +0.1
Or see this region's nucleotide sequence