Strain Fitness in Serratia liquefaciens MT49 around IAI46_24325

Experiment: Cobalt chloride 60 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cobalt chloride 60 uM, anaerobic
5,191,564	-		IAI46_24320	0.33	+0.6
5,191,566	+		IAI46_24320	0.33	+0.6
5,191,650	+		IAI46_24320	0.42	-0.3
5,191,650	+		IAI46_24320	0.42	+0.2
5,191,651	-		IAI46_24320	0.42	-0.0
5,191,654	+		IAI46_24320	0.42	-0.1
5,191,654	+		IAI46_24320	0.42	-1.1
5,191,655	-		IAI46_24320	0.42	+0.3
5,191,655	-		IAI46_24320	0.42	+0.7
5,191,655	-		IAI46_24320	0.42	-0.2
5,191,655	-		IAI46_24320	0.42	-0.7
5,191,655	-		IAI46_24320	0.42	+0.4
5,191,656	+		IAI46_24320	0.42	-0.2
5,191,657	-		IAI46_24320	0.43	-0.2
5,191,661	+		IAI46_24320	0.43	-0.0
5,191,662	-		IAI46_24320	0.43	-0.7
5,191,717	+		IAI46_24320	0.49	-1.4
5,191,718	-		IAI46_24320	0.49	+0.8
5,191,767	+		IAI46_24320	0.54	-0.2
5,191,928	-		IAI46_24320	0.72	+0.1
5,192,036	+		IAI46_24320	0.83	+0.3
5,192,070	+		IAI46_24320	0.87	-0.4
5,192,081	-		IAI46_24320	0.88	+1.1
5,192,104	+				+0.4
5,192,166	-				-0.3
5,192,205	-				+0.4
5,192,226	+				+1.0
5,192,226	+				-0.5
5,192,227	-				+0.4
5,192,239	-				+1.4
5,192,239	-				-1.0
5,192,239	-				-0.6
5,192,339	-				-0.4
5,192,347	-				+0.3
5,192,393	-				-0.3
5,192,414	+				+0.6
5,192,414	+				+0.1
5,192,414	+				-0.3
5,192,414	+				+0.4
5,192,414	+				-0.5
5,192,414	+				-0.9
5,192,415	-				+0.5
5,192,415	-				+0.7
5,192,418	-				+0.5
5,192,418	-				+0.4
5,192,438	+				+1.9
5,192,438	+				-0.4
5,192,438	+				+0.6
5,192,439	-				-1.0
5,192,454	+				+0.1
5,192,454	+				-0.8
5,192,454	+				-1.9
5,192,454	+				-0.6
5,192,455	-				+0.2
5,192,455	-				+0.6
5,192,473	+				+0.5
5,192,474	-				+0.7
5,192,474	-				+0.0
5,192,474	-				+1.2
5,192,474	-				-1.6
5,192,478	+				+0.1
5,192,479	-				-0.8
5,192,499	+				+0.1
5,192,500	-				+0.9
5,192,508	+				+0.0
5,192,508	+				-0.8
5,192,509	-				+0.2
5,192,518	-				-0.4
5,192,538	+				+0.1
5,192,539	-				+0.7
5,192,542	+				+0.0
5,192,542	+				-0.6
5,192,543	-				-0.8
5,192,567	+				+0.7
5,192,568	-				+0.6
5,192,576	+				+0.8
5,192,576	+				+0.2
5,192,576	+				-0.5
5,192,576	+				+0.4
5,192,577	-				-1.1
5,192,577	-				+0.4
5,192,578	+				+0.9
5,192,578	+				+0.6
5,192,579	-				+0.6
5,192,579	-				+1.3
5,192,579	-				+0.3
5,192,579	-				-0.6
5,192,658	+				-0.2
5,192,658	+				+1.1
5,192,659	-				+0.6
5,192,659	-				+1.3
5,192,659	-				+0.1
5,192,753	-		IAI46_24325	0.14	+0.3
5,192,780	+		IAI46_24325	0.16	-0.4
5,192,781	-		IAI46_24325	0.16	+0.8
5,192,781	-		IAI46_24325	0.16	+0.1
5,192,797	+		IAI46_24325	0.17	-1.0
5,192,798	-		IAI46_24325	0.17	-0.1
5,192,807	+		IAI46_24325	0.18	+0.8
5,192,808	-		IAI46_24325	0.18	+0.6
5,192,854	+		IAI46_24325	0.21	+0.3
5,192,854	+		IAI46_24325	0.21	+2.0
5,192,855	-		IAI46_24325	0.21	+0.3
5,192,857	+		IAI46_24325	0.21	+0.4
5,192,857	+		IAI46_24325	0.21	+0.9
5,192,876	+		IAI46_24325	0.23	-0.6
5,192,876	+		IAI46_24325	0.23	-0.5
5,192,877	-		IAI46_24325	0.23	-0.2
5,192,877	-		IAI46_24325	0.23	+1.0
5,192,877	-		IAI46_24325	0.23	-0.2
5,192,877	-		IAI46_24325	0.23	+0.5
5,192,940	+		IAI46_24325	0.27	+2.0
5,192,941	-		IAI46_24325	0.27	+0.0
5,192,956	+		IAI46_24325	0.28	+0.3
5,192,957	-		IAI46_24325	0.28	+0.2
5,193,161	-		IAI46_24325	0.42	-0.3
5,193,271	+		IAI46_24325	0.49	-0.1
5,193,272	-		IAI46_24325	0.50	-0.1
5,193,284	+		IAI46_24325	0.50	-0.4
5,193,575	+		IAI46_24325	0.70	-0.2
5,193,584	+		IAI46_24325	0.71	-0.2
5,193,584	+		IAI46_24325	0.71	-0.6
5,193,585	-		IAI46_24325	0.71	+0.2
5,193,585	-		IAI46_24325	0.71	+0.4
5,193,589	-		IAI46_24325	0.71	-0.1
5,193,628	+		IAI46_24325	0.74	-0.2
5,193,629	-		IAI46_24325	0.74	+0.1
5,193,629	-		IAI46_24325	0.74	-0.0
5,193,675	+		IAI46_24325	0.77	+0.8
5,193,742	+		IAI46_24325	0.81	-0.2
5,193,742	+		IAI46_24325	0.81	-0.2
5,193,743	-		IAI46_24325	0.81	+0.4
5,193,743	-		IAI46_24325	0.81	+0.4
5,193,755	+		IAI46_24325	0.82	+0.3
5,193,756	-		IAI46_24325	0.82	+0.0
5,193,803	+		IAI46_24325	0.86	+0.6
5,193,812	+		IAI46_24325	0.86	+0.6
5,193,823	+		IAI46_24325	0.87	+1.2
5,193,824	-		IAI46_24325	0.87	+0.2
5,193,824	-		IAI46_24325	0.87	+0.5
5,193,824	-		IAI46_24325	0.87	+0.6
5,193,963	-				-0.4
5,194,006	+				+0.3
5,194,006	+				-0.4
5,194,007	-				-0.4
5,194,010	+				-0.2
5,194,011	-				-0.3
5,194,011	-				-0.5
5,194,022	+				+0.3
5,194,022	+				+0.1
5,194,023	-				+0.8
5,194,023	-				+0.5
5,194,023	-				+0.6
5,194,023	-				+1.2
5,194,031	+				+0.2
5,194,032	-				+0.3
5,194,032	-				-0.1
5,194,053	-				+0.6
5,194,099	+				+0.1
5,194,099	+				+0.2
5,194,099	+				+0.6
5,194,100	-				+0.0
5,194,100	-				-0.7
5,194,100	-				-0.0
5,194,100	-				+0.4
5,194,100	-				+0.3
5,194,100	-				-0.4
5,194,100	-				+0.6
5,194,101	+				-0.6
5,194,101	+				+0.6
5,194,101	+				-0.5
5,194,130	+				+0.2
5,194,178	+				-0.2
5,194,178	+				-0.1
5,194,179	-				+0.4
5,194,179	-				+0.8
5,194,184	+				+0.1
5,194,185	-				+0.4
5,194,185	-				-1.8
5,194,201	+				+0.4
5,194,201	+				-0.8
5,194,376	-		IAI46_24330	0.21	-0.6
5,194,407	+		IAI46_24330	0.25	+0.1
5,194,651	+		IAI46_24330	0.52	-0.4
5,194,652	-		IAI46_24330	0.52	+0.8
5,194,685	-		IAI46_24330	0.56	+0.8
5,194,763	+		IAI46_24330	0.64	+0.1
5,194,949	+		IAI46_24330	0.85	+1.5
5,194,950	-		IAI46_24330	0.85	-1.2
5,194,950	-		IAI46_24330	0.85	+0.1
5,194,966	+		IAI46_24330	0.87	+0.6
5,194,973	+		IAI46_24330	0.88	+0.5
5,194,973	+		IAI46_24330	0.88	+0.2
5,194,973	+		IAI46_24330	0.88	+0.2
5,194,974	-		IAI46_24330	0.88	+0.3
5,194,979	+		IAI46_24330	0.88	-0.3