Strain Fitness in Serratia liquefaciens MT49 around IAI46_22575

Experiment: Cobalt chloride 60 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cobalt chloride 60 uM, anaerobic
4,799,189	+		IAI46_22565	0.46	-0.0
4,799,190	-		IAI46_22565	0.46	+0.2
4,799,190	-		IAI46_22565	0.46	-0.8
4,799,251	-		IAI46_22565	0.54	-0.9
4,799,269	+		IAI46_22565	0.56	+0.1
4,799,270	-		IAI46_22565	0.56	-0.6
4,799,369	+		IAI46_22565	0.69	-0.6
4,799,370	-		IAI46_22565	0.69	-0.7
4,799,370	-		IAI46_22565	0.69	+0.2
4,799,370	-		IAI46_22565	0.69	-0.3
4,799,370	-		IAI46_22565	0.69	-0.3
4,799,370	-		IAI46_22565	0.69	-0.2
4,799,370	-		IAI46_22565	0.69	-1.4
4,799,370	-		IAI46_22565	0.69	+0.7
4,799,371	+		IAI46_22565	0.69	+0.2
4,799,371	+		IAI46_22565	0.69	+1.1
4,799,372	-		IAI46_22565	0.69	+0.3
4,799,372	-		IAI46_22565	0.69	+0.4
4,799,372	-		IAI46_22565	0.69	+0.1
4,799,372	-		IAI46_22565	0.69	-0.4
4,799,517	-		IAI46_22565	0.88	-0.3
4,799,579	+				-0.3
4,799,579	+				-0.7
4,799,580	-				+0.1
4,799,580	-				+0.9
4,799,580	-				+0.1
4,799,756	-		IAI46_22570	0.38	-0.5
4,799,756	-		IAI46_22570	0.38	-0.1
4,799,888	+		IAI46_22570	0.72	+0.9
4,799,889	-		IAI46_22570	0.73	+0.3
4,799,905	-		IAI46_22570	0.77	-0.3
4,799,905	-		IAI46_22570	0.77	+0.1
4,799,911	-		IAI46_22570	0.78	-0.1
4,800,013	+				-0.6
4,800,014	-				+0.2
4,800,014	-				+0.3
4,800,014	-				+0.6
4,800,035	+				+0.5
4,800,035	+				+0.9
4,800,080	+				+0.0
4,800,080	+				+0.6
4,800,080	+				+0.2
4,800,080	+				-0.0
4,800,086	+				-0.5
4,800,086	+				+0.2
4,800,086	+				-0.7
4,800,087	-				+0.9
4,800,087	-				+0.6
4,800,122	+				-0.3
4,800,122	+				+0.3
4,800,123	-				-0.5
4,800,132	+				-0.0
4,800,188	+				+1.1
4,800,189	-				+0.4
4,800,237	+				+0.7
4,800,237	+				+0.2
4,800,237	+				-0.3
4,800,238	-				-1.5
4,800,238	-				+0.3
4,800,238	-				+0.3
4,800,288	+				-0.3
4,800,288	+				+0.2
4,800,377	+		IAI46_22575	0.14	+0.6
4,800,377	+		IAI46_22575	0.14	+0.7
4,800,387	+		IAI46_22575	0.15	-1.4
4,800,387	+		IAI46_22575	0.15	+0.5
4,800,391	-		IAI46_22575	0.15	+0.2
4,800,468	+		IAI46_22575	0.21	+0.6
4,800,545	+		IAI46_22575	0.27	-0.8
4,800,545	+		IAI46_22575	0.27	-0.6
4,800,571	+		IAI46_22575	0.29	-0.6
4,800,607	+		IAI46_22575	0.31	+1.0
4,800,607	+		IAI46_22575	0.31	+0.1
4,800,607	+		IAI46_22575	0.31	+0.4
4,800,607	+		IAI46_22575	0.31	+0.5
4,800,607	+		IAI46_22575	0.31	+0.2
4,800,608	-		IAI46_22575	0.31	+0.2
4,800,608	-		IAI46_22575	0.31	+1.1
4,800,819	+		IAI46_22575	0.47	+1.7
4,800,820	-		IAI46_22575	0.47	-0.6
4,800,918	+		IAI46_22575	0.55	+0.7
4,800,918	+		IAI46_22575	0.55	-0.5
4,800,918	+		IAI46_22575	0.55	-2.8
4,800,918	+		IAI46_22575	0.55	-0.6
4,800,918	+		IAI46_22575	0.55	+1.4
4,800,919	-		IAI46_22575	0.55	+0.4
4,800,919	-		IAI46_22575	0.55	+0.3
4,800,920	+		IAI46_22575	0.55	-0.3
4,800,921	-		IAI46_22575	0.55	-0.2
4,800,921	-		IAI46_22575	0.55	-0.4
4,800,927	-		IAI46_22575	0.55	-0.9
4,800,995	+		IAI46_22575	0.60	+0.1
4,801,225	+		IAI46_22575	0.77	-0.1
4,801,226	-		IAI46_22575	0.77	+0.1
4,801,329	-		IAI46_22575	0.85	-1.4
4,801,410	+				+0.0
4,801,519	+				+0.3
4,801,519	+				-0.8
4,801,520	-				-0.2
4,801,538	+				-0.3
4,801,539	-				+0.2
4,801,539	-				-0.2
4,801,539	-				+0.7
4,801,542	+				+0.3
4,801,543	-				-0.1
4,801,632	-				+0.4
4,801,689	-				+1.1
4,801,702	+				-1.0
4,801,702	+				+0.7
4,801,702	+				+0.1
4,801,703	-				+0.1
4,801,703	-				-0.5
4,801,723	-				+0.2
4,801,723	-				+0.1
4,801,734	+				-0.1
4,801,734	+				+0.3
4,801,735	-				+0.1
4,801,735	-				+0.3
4,801,770	-		IAI46_22580	0.19	-1.1
4,801,792	-		IAI46_22580	0.26	-0.6
4,801,824	+		IAI46_22580	0.35	-1.7
4,801,825	-		IAI46_22580	0.36	-0.0
4,801,828	+		IAI46_22580	0.37	+0.0
4,801,828	+		IAI46_22580	0.37	+0.0
4,801,829	-		IAI46_22580	0.37	+1.0
4,801,829	-		IAI46_22580	0.37	+0.3
4,801,829	-		IAI46_22580	0.37	+0.3
4,801,829	-		IAI46_22580	0.37	+0.6
4,801,902	-		IAI46_22580	0.58	+0.8
4,802,076	+		IAI46_22585	0.11	-0.1
4,802,089	+		IAI46_22585	0.14	-0.3
4,802,090	-		IAI46_22585	0.15	+1.2
4,802,098	+		IAI46_22585	0.17	-0.0
4,802,175	+		IAI46_22585	0.39	+0.1
4,802,176	-		IAI46_22585	0.39	-0.4
4,802,185	+		IAI46_22585	0.42	+0.4
4,802,185	+		IAI46_22585	0.42	+1.5
4,802,205	+		IAI46_22585	0.47	+0.3
4,802,205	+		IAI46_22585	0.47	+1.2
4,802,205	+		IAI46_22585	0.47	+0.5
4,802,205	+		IAI46_22585	0.47	-0.2
4,802,206	-		IAI46_22585	0.48	+0.6
4,802,206	-		IAI46_22585	0.48	+1.1
4,802,206	-		IAI46_22585	0.48	+1.1
4,802,206	-		IAI46_22585	0.48	+0.1
4,802,206	-		IAI46_22585	0.48	+1.1
4,802,207	+		IAI46_22585	0.48	+0.1
4,802,207	+		IAI46_22585	0.48	-0.6
4,802,207	+		IAI46_22585	0.48	+0.9
4,802,207	+		IAI46_22585	0.48	+1.4
4,802,207	+		IAI46_22585	0.48	-0.3
4,802,208	-		IAI46_22585	0.48	+0.3
4,802,208	-		IAI46_22585	0.48	+0.8
4,802,208	-		IAI46_22585	0.48	+0.8
4,802,267	+		IAI46_22585	0.65	+0.5
4,802,268	-		IAI46_22585	0.65	+0.6
4,802,268	-		IAI46_22585	0.65	-1.2
4,802,309	-		IAI46_22585	0.77	+0.0
4,802,331	-		IAI46_22585	0.83	+0.4
4,802,333	+		IAI46_22585	0.84	+0.3
4,802,334	-		IAI46_22585	0.84	-0.4
4,802,364	-				+0.5
4,802,364	-				+0.5
4,802,404	+				+0.2
4,802,404	+				-0.3
4,802,405	-				+0.7
4,802,434	+				-0.7
4,802,469	+				+0.7
4,802,498	+				-0.6
4,802,498	+				-0.2
4,802,498	+				+0.1
4,802,498	+				+0.3
4,802,498	+				+0.8
4,802,498	+				+0.5
4,802,499	-				-0.1
4,802,499	-				+0.1
4,802,499	-				-0.7
4,802,500	+				+0.2
4,802,501	-				+1.5
4,802,501	-				-0.4