Experiment: Cobalt chloride 60 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_22395 and IAI46_22400 are separated by 71 nucleotides IAI46_22400 and IAI46_22405 are separated by 55 nucleotides IAI46_22405 and IAI46_22410 are separated by 140 nucleotides IAI46_22410 and IAI46_22415 overlap by 1 nucleotides
IAI46_22395: IAI46_22395 - outer membrane-stress sensor serine endopeptidase DegS, at 4,772,677 to 4,773,735
_22395
IAI46_22400: IAI46_22400 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 4,773,807 to 4,775,066
_22400
IAI46_22405: IAI46_22405 - BolA family iron metabolism protein IbaG, at 4,775,122 to 4,775,376
_22405
IAI46_22410: IAI46_22410 - lipid asymmetry maintenance protein MlaB, at 4,775,517 to 4,775,819
_22410
IAI46_22415: IAI46_22415 - phospholipid-binding protein MlaC, at 4,775,819 to 4,776,448
_22415
Position (kb) 4773
4774
4775
4776 Strain fitness (log2 ratio) -1
0
1
2 at 4773.733 kb on + strand at 4773.733 kb on + strand at 4773.733 kb on + strand at 4773.734 kb on - strand at 4773.763 kb on + strand at 4773.776 kb on - strand at 4775.169 kb on - strand, within IAI46_22405 at 4775.169 kb on - strand, within IAI46_22405 at 4775.176 kb on - strand, within IAI46_22405 at 4775.194 kb on - strand, within IAI46_22405 at 4775.211 kb on - strand, within IAI46_22405 at 4775.211 kb on - strand, within IAI46_22405 at 4775.211 kb on - strand, within IAI46_22405 at 4775.211 kb on - strand, within IAI46_22405 at 4775.229 kb on - strand, within IAI46_22405 at 4775.359 kb on - strand at 4775.377 kb on - strand at 4775.392 kb on - strand at 4775.406 kb on - strand at 4775.406 kb on - strand at 4775.406 kb on - strand at 4775.423 kb on - strand at 4775.444 kb on - strand at 4775.465 kb on + strand at 4775.466 kb on - strand at 4775.541 kb on + strand at 4775.541 kb on + strand at 4775.542 kb on - strand at 4775.542 kb on - strand at 4775.542 kb on - strand at 4775.542 kb on - strand at 4775.557 kb on + strand, within IAI46_22410 at 4775.557 kb on + strand, within IAI46_22410 at 4775.706 kb on - strand, within IAI46_22410 at 4775.839 kb on + strand at 4775.896 kb on + strand, within IAI46_22415 at 4775.897 kb on - strand, within IAI46_22415 at 4775.897 kb on - strand, within IAI46_22415 at 4775.897 kb on - strand, within IAI46_22415 at 4775.900 kb on + strand, within IAI46_22415 at 4775.900 kb on + strand, within IAI46_22415 at 4775.901 kb on - strand, within IAI46_22415 at 4775.901 kb on - strand, within IAI46_22415 at 4775.905 kb on + strand, within IAI46_22415 at 4775.905 kb on + strand, within IAI46_22415 at 4775.905 kb on + strand, within IAI46_22415 at 4775.905 kb on + strand, within IAI46_22415 at 4775.964 kb on + strand, within IAI46_22415 at 4775.964 kb on + strand, within IAI46_22415 at 4775.965 kb on - strand, within IAI46_22415
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 60 uM, anaerobic remove 4,773,733 + +0.1 4,773,733 + +0.3 4,773,733 + +1.5 4,773,734 - +0.7 4,773,763 + -0.0 4,773,776 - +0.5 4,775,169 - IAI46_22405 0.18 -0.4 4,775,169 - IAI46_22405 0.18 -0.7 4,775,176 - IAI46_22405 0.21 -0.4 4,775,194 - IAI46_22405 0.28 +0.3 4,775,211 - IAI46_22405 0.35 -0.0 4,775,211 - IAI46_22405 0.35 +0.7 4,775,211 - IAI46_22405 0.35 +1.0 4,775,211 - IAI46_22405 0.35 -0.9 4,775,229 - IAI46_22405 0.42 -0.0 4,775,359 - +0.8 4,775,377 - +0.1 4,775,392 - +0.4 4,775,406 - -0.1 4,775,406 - -0.7 4,775,406 - +0.1 4,775,423 - +0.3 4,775,444 - +0.5 4,775,465 + +0.4 4,775,466 - -0.3 4,775,541 + -0.6 4,775,541 + -0.7 4,775,542 - +0.3 4,775,542 - -0.3 4,775,542 - +1.1 4,775,542 - -0.4 4,775,557 + IAI46_22410 0.13 -0.1 4,775,557 + IAI46_22410 0.13 -0.4 4,775,706 - IAI46_22410 0.62 +0.6 4,775,839 + +1.2 4,775,896 + IAI46_22415 0.12 +0.6 4,775,897 - IAI46_22415 0.12 +2.1 4,775,897 - IAI46_22415 0.12 +0.0 4,775,897 - IAI46_22415 0.12 +0.3 4,775,900 + IAI46_22415 0.13 -0.2 4,775,900 + IAI46_22415 0.13 +0.2 4,775,901 - IAI46_22415 0.13 -0.2 4,775,901 - IAI46_22415 0.13 -0.9 4,775,905 + IAI46_22415 0.14 -0.0 4,775,905 + IAI46_22415 0.14 -1.1 4,775,905 + IAI46_22415 0.14 +0.0 4,775,905 + IAI46_22415 0.14 +0.2 4,775,964 + IAI46_22415 0.23 +0.1 4,775,964 + IAI46_22415 0.23 -0.3 4,775,965 - IAI46_22415 0.23 -0.2
Or see this region's nucleotide sequence