Experiment: Cobalt chloride 60 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15825 and IAI46_15830 are separated by 53 nucleotides IAI46_15830 and IAI46_15835 are separated by 212 nucleotides IAI46_15835 and IAI46_15840 are separated by 481 nucleotides
IAI46_15825: IAI46_15825 - uracil-xanthine permease, at 3,324,207 to 3,325,532
_15825
IAI46_15830: IAI46_15830 - Tn3 family transposase, at 3,325,586 to 3,326,037
_15830
IAI46_15835: IAI46_15835 - flagellar hook-basal body complex protein FliE, at 3,326,250 to 3,326,564
_15835
IAI46_15840: IAI46_15840 - flagellar M-ring protein FliF, at 3,327,046 to 3,328,746
_15840
Position (kb)
3326
3327 Strain fitness (log2 ratio)
-1
0
1 at 3325.281 kb on - strand, within IAI46_15825 at 3325.433 kb on - strand at 3325.458 kb on - strand at 3325.487 kb on - strand at 3325.523 kb on - strand at 3325.737 kb on + strand, within IAI46_15830 at 3325.737 kb on + strand, within IAI46_15830 at 3325.737 kb on + strand, within IAI46_15830 at 3325.738 kb on - strand, within IAI46_15830 at 3325.839 kb on + strand, within IAI46_15830 at 3325.840 kb on - strand, within IAI46_15830 at 3325.841 kb on + strand, within IAI46_15830 at 3325.841 kb on + strand, within IAI46_15830 at 3325.939 kb on + strand, within IAI46_15830 at 3325.941 kb on + strand, within IAI46_15830 at 3325.941 kb on + strand, within IAI46_15830 at 3326.026 kb on - strand at 3326.089 kb on + strand at 3326.167 kb on + strand at 3326.179 kb on + strand at 3326.180 kb on - strand at 3326.261 kb on + strand at 3326.279 kb on - strand at 3326.294 kb on + strand, within IAI46_15835 at 3326.297 kb on + strand, within IAI46_15835 at 3326.298 kb on - strand, within IAI46_15835 at 3326.565 kb on + strand at 3326.566 kb on - strand at 3326.614 kb on - strand at 3326.634 kb on - strand at 3326.634 kb on - strand at 3326.653 kb on - strand at 3326.665 kb on + strand at 3326.665 kb on + strand at 3326.718 kb on + strand at 3326.721 kb on + strand at 3326.721 kb on + strand at 3326.722 kb on - strand at 3326.748 kb on + strand at 3326.750 kb on + strand at 3326.808 kb on + strand at 3326.809 kb on - strand at 3326.821 kb on + strand at 3326.821 kb on + strand at 3326.821 kb on + strand at 3326.913 kb on + strand at 3326.914 kb on - strand at 3326.918 kb on + strand at 3326.919 kb on - strand at 3326.920 kb on + strand at 3326.921 kb on - strand at 3326.924 kb on + strand at 3326.924 kb on + strand at 3326.924 kb on + strand at 3326.925 kb on - strand at 3326.925 kb on - strand at 3326.925 kb on - strand at 3326.925 kb on - strand at 3326.925 kb on - strand at 3326.925 kb on - strand at 3326.926 kb on + strand at 3326.926 kb on + strand at 3326.926 kb on + strand at 3326.926 kb on + strand at 3326.926 kb on + strand at 3326.927 kb on - strand at 3326.927 kb on - strand at 3326.927 kb on - strand at 3326.927 kb on - strand at 3326.927 kb on - strand at 3326.927 kb on - strand at 3326.932 kb on + strand at 3326.933 kb on - strand at 3326.933 kb on - strand at 3326.962 kb on + strand at 3326.995 kb on - strand at 3327.214 kb on + strand at 3327.214 kb on + strand at 3327.215 kb on - strand at 3327.500 kb on + strand, within IAI46_15840
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 60 uM, anaerobic remove 3,325,281 - IAI46_15825 0.81 +0.6 3,325,433 - -0.1 3,325,458 - +0.8 3,325,487 - +0.3 3,325,523 - -0.1 3,325,737 + IAI46_15830 0.33 +0.3 3,325,737 + IAI46_15830 0.33 +1.1 3,325,737 + IAI46_15830 0.33 +0.8 3,325,738 - IAI46_15830 0.34 +0.5 3,325,839 + IAI46_15830 0.56 -0.1 3,325,840 - IAI46_15830 0.56 +0.1 3,325,841 + IAI46_15830 0.56 -0.1 3,325,841 + IAI46_15830 0.56 +0.1 3,325,939 + IAI46_15830 0.78 +0.8 3,325,941 + IAI46_15830 0.79 -0.1 3,325,941 + IAI46_15830 0.79 +0.1 3,326,026 - -1.3 3,326,089 + +0.9 3,326,167 + -0.4 3,326,179 + +0.1 3,326,180 - +1.2 3,326,261 + -0.9 3,326,279 - +0.5 3,326,294 + IAI46_15835 0.14 +0.3 3,326,297 + IAI46_15835 0.15 -0.6 3,326,298 - IAI46_15835 0.15 +0.5 3,326,565 + -0.5 3,326,566 - -0.5 3,326,614 - +0.2 3,326,634 - +0.5 3,326,634 - +1.3 3,326,653 - -0.1 3,326,665 + -1.1 3,326,665 + +0.1 3,326,718 + -1.1 3,326,721 + -0.2 3,326,721 + +0.4 3,326,722 - +0.4 3,326,748 + -1.2 3,326,750 + -1.1 3,326,808 + -1.0 3,326,809 - -0.2 3,326,821 + +0.9 3,326,821 + -0.6 3,326,821 + -0.5 3,326,913 + +0.1 3,326,914 - +1.2 3,326,918 + +0.7 3,326,919 - -0.2 3,326,920 + -0.1 3,326,921 - -0.1 3,326,924 + -0.4 3,326,924 + +0.6 3,326,924 + +0.5 3,326,925 - +0.5 3,326,925 - +1.5 3,326,925 - +0.1 3,326,925 - -1.2 3,326,925 - +0.3 3,326,925 - -0.2 3,326,926 + +1.1 3,326,926 + +0.8 3,326,926 + -0.3 3,326,926 + -0.3 3,326,926 + +1.2 3,326,927 - +1.2 3,326,927 - -0.5 3,326,927 - -1.4 3,326,927 - +0.1 3,326,927 - -0.6 3,326,927 - +0.1 3,326,932 + -0.1 3,326,933 - +1.0 3,326,933 - -0.2 3,326,962 + -1.1 3,326,995 - +0.6 3,327,214 + +0.5 3,327,214 + +0.1 3,327,215 - +0.2 3,327,500 + IAI46_15840 0.27 +0.3
Or see this region's nucleotide sequence