Experiment: Cobalt chloride 60 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14750 and IAI46_14755 are separated by 70 nucleotides IAI46_14755 and IAI46_14760 are separated by 39 nucleotides IAI46_14760 and IAI46_14765 are separated by 88 nucleotides IAI46_14765 and IAI46_14770 are separated by 241 nucleotides
IAI46_14750: IAI46_14750 - hypothetical protein, at 3,124,498 to 3,124,857
_14750
IAI46_14755: IAI46_14755 - ASCH domain-containing protein, at 3,124,928 to 3,125,236
_14755
IAI46_14760: IAI46_14760 - YebG family protein, at 3,125,276 to 3,125,599
_14760
IAI46_14765: IAI46_14765 - ATP-dependent RNA helicase DbpA, at 3,125,688 to 3,127,070
_14765
IAI46_14770: IAI46_14770 - formate-dependent phosphoribosylglycinamide formyltransferase, at 3,127,312 to 3,128,490
_14770
Position (kb)
3125
3126
3127
3128 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3124.706 kb on + strand, within IAI46_14750 at 3124.804 kb on - strand, within IAI46_14750 at 3125.043 kb on - strand, within IAI46_14755 at 3125.124 kb on - strand, within IAI46_14755 at 3125.170 kb on + strand, within IAI46_14755 at 3125.171 kb on - strand, within IAI46_14755 at 3125.171 kb on - strand, within IAI46_14755 at 3125.269 kb on + strand at 3125.277 kb on + strand at 3125.278 kb on - strand at 3125.278 kb on - strand at 3125.581 kb on - strand at 3125.656 kb on - strand at 3125.656 kb on - strand at 3125.786 kb on - strand at 3125.993 kb on - strand, within IAI46_14765 at 3126.122 kb on - strand, within IAI46_14765 at 3126.122 kb on - strand, within IAI46_14765 at 3126.269 kb on + strand, within IAI46_14765 at 3126.270 kb on - strand, within IAI46_14765 at 3126.912 kb on - strand, within IAI46_14765 at 3126.939 kb on + strand at 3126.940 kb on - strand at 3127.076 kb on + strand at 3127.083 kb on + strand at 3127.084 kb on - strand at 3127.085 kb on + strand at 3127.085 kb on + strand at 3127.256 kb on - strand at 3127.258 kb on - strand at 3127.285 kb on - strand at 3127.285 kb on - strand at 3127.285 kb on - strand at 3127.303 kb on + strand at 3127.311 kb on + strand at 3127.312 kb on - strand at 3127.316 kb on + strand at 3127.317 kb on - strand at 3127.317 kb on - strand at 3127.321 kb on - strand at 3127.486 kb on - strand, within IAI46_14770 at 3127.488 kb on + strand, within IAI46_14770 at 3127.488 kb on + strand, within IAI46_14770 at 3127.489 kb on - strand, within IAI46_14770 at 3127.544 kb on - strand, within IAI46_14770 at 3127.849 kb on + strand, within IAI46_14770 at 3127.955 kb on + strand, within IAI46_14770 at 3127.955 kb on + strand, within IAI46_14770
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 60 uM, anaerobic remove 3,124,706 + IAI46_14750 0.58 +0.6 3,124,804 - IAI46_14750 0.85 -1.9 3,125,043 - IAI46_14755 0.37 +0.7 3,125,124 - IAI46_14755 0.63 +0.4 3,125,170 + IAI46_14755 0.78 -0.1 3,125,171 - IAI46_14755 0.79 +0.0 3,125,171 - IAI46_14755 0.79 +0.0 3,125,269 + +0.1 3,125,277 + +0.7 3,125,278 - +0.3 3,125,278 - +0.4 3,125,581 - +0.3 3,125,656 - +0.4 3,125,656 - -0.6 3,125,786 - -0.2 3,125,993 - IAI46_14765 0.22 +0.6 3,126,122 - IAI46_14765 0.31 +0.3 3,126,122 - IAI46_14765 0.31 -0.4 3,126,269 + IAI46_14765 0.42 +1.0 3,126,270 - IAI46_14765 0.42 +0.6 3,126,912 - IAI46_14765 0.89 -0.3 3,126,939 + +1.3 3,126,940 - -1.5 3,127,076 + -1.2 3,127,083 + -1.2 3,127,084 - -0.2 3,127,085 + -1.1 3,127,085 + +0.1 3,127,256 - -1.0 3,127,258 - -0.9 3,127,285 - +0.2 3,127,285 - +0.6 3,127,285 - -0.7 3,127,303 + -0.0 3,127,311 + +0.6 3,127,312 - -0.3 3,127,316 + -1.3 3,127,317 - -1.2 3,127,317 - -0.2 3,127,321 - +0.4 3,127,486 - IAI46_14770 0.15 +0.1 3,127,488 + IAI46_14770 0.15 +0.8 3,127,488 + IAI46_14770 0.15 +0.7 3,127,489 - IAI46_14770 0.15 +2.0 3,127,544 - IAI46_14770 0.20 -0.4 3,127,849 + IAI46_14770 0.46 +0.1 3,127,955 + IAI46_14770 0.55 -0.6 3,127,955 + IAI46_14770 0.55 -0.8
Or see this region's nucleotide sequence