Experiment: Cobalt chloride 60 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13785 and IAI46_13790 overlap by 1 nucleotides IAI46_13790 and IAI46_13795 overlap by 8 nucleotides IAI46_13795 and IAI46_13800 are separated by 32 nucleotides IAI46_13800 and IAI46_13805 overlap by 8 nucleotides
IAI46_13785: IAI46_13785 - phosphoadenosine phosphosulfate reductase family protein, at 2,932,479 to 2,933,396
_13785
IAI46_13790: IAI46_13790 - Lar family restriction alleviation protein, at 2,933,396 to 2,933,593
_13790
IAI46_13795: IAI46_13795 - stationary-phase-induced ribosome-associated protein, at 2,933,586 to 2,933,804
_13795
IAI46_13800: IAI46_13800 - hypothetical protein, at 2,933,837 to 2,934,115
_13800
IAI46_13805: IAI46_13805 - hypothetical protein, at 2,934,108 to 2,934,554
_13805
Position (kb)
2933
2934 Strain fitness (log2 ratio)
-1
0
1
2 at 2932.718 kb on + strand, within IAI46_13785 at 2932.718 kb on + strand, within IAI46_13785 at 2932.718 kb on + strand, within IAI46_13785 at 2932.718 kb on + strand, within IAI46_13785 at 2932.718 kb on + strand, within IAI46_13785 at 2932.718 kb on + strand, within IAI46_13785 at 2932.854 kb on + strand, within IAI46_13785 at 2933.305 kb on - strand at 2933.471 kb on + strand, within IAI46_13790 at 2933.471 kb on + strand, within IAI46_13790 at 2933.471 kb on + strand, within IAI46_13790 at 2933.471 kb on + strand, within IAI46_13790 at 2933.472 kb on - strand, within IAI46_13790 at 2933.492 kb on - strand, within IAI46_13790 at 2933.515 kb on + strand, within IAI46_13790 at 2933.516 kb on - strand, within IAI46_13790 at 2933.516 kb on - strand, within IAI46_13790 at 2933.521 kb on + strand, within IAI46_13790 at 2933.521 kb on + strand, within IAI46_13790 at 2933.523 kb on + strand, within IAI46_13790 at 2933.524 kb on - strand, within IAI46_13790 at 2933.597 kb on + strand at 2933.695 kb on + strand, within IAI46_13795 at 2933.752 kb on + strand, within IAI46_13795 at 2933.768 kb on - strand, within IAI46_13795 at 2933.768 kb on - strand, within IAI46_13795 at 2933.770 kb on + strand, within IAI46_13795 at 2933.801 kb on - strand at 2933.801 kb on - strand at 2933.833 kb on + strand at 2933.833 kb on + strand at 2933.834 kb on - strand at 2933.849 kb on - strand at 2933.900 kb on + strand, within IAI46_13800 at 2933.900 kb on + strand, within IAI46_13800 at 2933.900 kb on + strand, within IAI46_13800 at 2933.901 kb on - strand, within IAI46_13800 at 2933.901 kb on - strand, within IAI46_13800 at 2933.901 kb on - strand, within IAI46_13800 at 2934.113 kb on + strand at 2934.244 kb on - strand, within IAI46_13805
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 60 uM, anaerobic remove 2,932,718 + IAI46_13785 0.26 +0.6 2,932,718 + IAI46_13785 0.26 +0.1 2,932,718 + IAI46_13785 0.26 -0.3 2,932,718 + IAI46_13785 0.26 -0.2 2,932,718 + IAI46_13785 0.26 -0.1 2,932,718 + IAI46_13785 0.26 +0.7 2,932,854 + IAI46_13785 0.41 -0.3 2,933,305 - -0.1 2,933,471 + IAI46_13790 0.38 +0.5 2,933,471 + IAI46_13790 0.38 -0.4 2,933,471 + IAI46_13790 0.38 -0.3 2,933,471 + IAI46_13790 0.38 +1.6 2,933,472 - IAI46_13790 0.38 -0.0 2,933,492 - IAI46_13790 0.48 -1.2 2,933,515 + IAI46_13790 0.60 -0.9 2,933,516 - IAI46_13790 0.61 +1.0 2,933,516 - IAI46_13790 0.61 +0.6 2,933,521 + IAI46_13790 0.63 +0.8 2,933,521 + IAI46_13790 0.63 -0.9 2,933,523 + IAI46_13790 0.64 -0.5 2,933,524 - IAI46_13790 0.65 +0.1 2,933,597 + +0.2 2,933,695 + IAI46_13795 0.50 +0.1 2,933,752 + IAI46_13795 0.76 +0.3 2,933,768 - IAI46_13795 0.83 +0.3 2,933,768 - IAI46_13795 0.83 +1.4 2,933,770 + IAI46_13795 0.84 -0.3 2,933,801 - +0.6 2,933,801 - -0.4 2,933,833 + +0.6 2,933,833 + +0.4 2,933,834 - +1.1 2,933,849 - +1.0 2,933,900 + IAI46_13800 0.23 -0.3 2,933,900 + IAI46_13800 0.23 -0.0 2,933,900 + IAI46_13800 0.23 +2.2 2,933,901 - IAI46_13800 0.23 +0.9 2,933,901 - IAI46_13800 0.23 +0.9 2,933,901 - IAI46_13800 0.23 +0.5 2,934,113 + -0.3 2,934,244 - IAI46_13805 0.30 +0.2
Or see this region's nucleotide sequence