Experiment: Cobalt chloride 60 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12840 and IAI46_12845 are separated by 1 nucleotides IAI46_12845 and IAI46_12850 are separated by 9 nucleotides
IAI46_12840: IAI46_12840 - hydroxyacid dehydrogenase, at 2,735,568 to 2,736,548
_12840
IAI46_12845: IAI46_12845 - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, at 2,736,550 to 2,737,365
_12845
IAI46_12850: IAI46_12850 - NAD-dependent succinate-semialdehyde dehydrogenase, at 2,737,375 to 2,738,808
_12850
Position (kb)
2736
2737
2738 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2735.740 kb on - strand, within IAI46_12840 at 2736.031 kb on + strand, within IAI46_12840 at 2736.032 kb on - strand, within IAI46_12840 at 2736.096 kb on - strand, within IAI46_12840 at 2736.236 kb on + strand, within IAI46_12840 at 2736.236 kb on + strand, within IAI46_12840 at 2736.430 kb on + strand, within IAI46_12840 at 2736.431 kb on - strand, within IAI46_12840 at 2736.496 kb on - strand at 2736.538 kb on - strand at 2736.650 kb on - strand, within IAI46_12845 at 2736.772 kb on + strand, within IAI46_12845 at 2736.972 kb on - strand, within IAI46_12845 at 2737.169 kb on - strand, within IAI46_12845 at 2737.197 kb on + strand, within IAI46_12845 at 2737.198 kb on - strand, within IAI46_12845 at 2737.240 kb on + strand, within IAI46_12845 at 2737.376 kb on + strand at 2737.410 kb on - strand at 2737.420 kb on - strand at 2737.497 kb on - strand at 2737.497 kb on - strand at 2737.574 kb on + strand, within IAI46_12850 at 2737.728 kb on - strand, within IAI46_12850 at 2738.042 kb on - strand, within IAI46_12850 at 2738.177 kb on + strand, within IAI46_12850 at 2738.178 kb on - strand, within IAI46_12850 at 2738.272 kb on + strand, within IAI46_12850 at 2738.272 kb on + strand, within IAI46_12850 at 2738.273 kb on - strand, within IAI46_12850 at 2738.301 kb on + strand, within IAI46_12850
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 60 uM, anaerobic remove 2,735,740 - IAI46_12840 0.18 -0.1 2,736,031 + IAI46_12840 0.47 +1.2 2,736,032 - IAI46_12840 0.47 -0.9 2,736,096 - IAI46_12840 0.54 +0.7 2,736,236 + IAI46_12840 0.68 -0.7 2,736,236 + IAI46_12840 0.68 +1.2 2,736,430 + IAI46_12840 0.88 -0.1 2,736,431 - IAI46_12840 0.88 +0.0 2,736,496 - +0.6 2,736,538 - +1.3 2,736,650 - IAI46_12845 0.12 +0.7 2,736,772 + IAI46_12845 0.27 -1.8 2,736,972 - IAI46_12845 0.52 +0.3 2,737,169 - IAI46_12845 0.76 +0.4 2,737,197 + IAI46_12845 0.79 +0.0 2,737,198 - IAI46_12845 0.79 +2.0 2,737,240 + IAI46_12845 0.85 +0.1 2,737,376 + -0.4 2,737,410 - -0.2 2,737,420 - -0.1 2,737,497 - -0.3 2,737,497 - +0.5 2,737,574 + IAI46_12850 0.14 +1.2 2,737,728 - IAI46_12850 0.25 +0.3 2,738,042 - IAI46_12850 0.47 +1.1 2,738,177 + IAI46_12850 0.56 -0.9 2,738,178 - IAI46_12850 0.56 -0.9 2,738,272 + IAI46_12850 0.63 +0.5 2,738,272 + IAI46_12850 0.63 -0.2 2,738,273 - IAI46_12850 0.63 -0.5 2,738,301 + IAI46_12850 0.65 +0.4
Or see this region's nucleotide sequence