Experiment: Cobalt chloride 60 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11700 and IAI46_11705 are separated by 33 nucleotides IAI46_11705 and IAI46_11710 are separated by 88 nucleotides IAI46_11710 and IAI46_11715 are separated by 148 nucleotides IAI46_11715 and IAI46_11720 are separated by 35 nucleotides
IAI46_11700: IAI46_11700 - MFS transporter, at 2,469,702 to 2,471,189
_11700
IAI46_11705: IAI46_11705 - DUF1161 domain-containing protein, at 2,471,223 to 2,471,522
_11705
IAI46_11710: IAI46_11710 - DUF1283 family protein, at 2,471,611 to 2,471,979
_11710
IAI46_11715: IAI46_11715 - YnfA family protein, at 2,472,128 to 2,472,454
_11715
IAI46_11720: IAI46_11720 - bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG, at 2,472,490 to 2,473,239
_11720
Position (kb)
2471
2472 Strain fitness (log2 ratio)
-1
0
1
2 at 2470.286 kb on - strand, within IAI46_11700 at 2470.289 kb on + strand, within IAI46_11700 at 2470.290 kb on - strand, within IAI46_11700 at 2470.290 kb on - strand, within IAI46_11700 at 2470.568 kb on + strand, within IAI46_11700 at 2470.683 kb on + strand, within IAI46_11700 at 2470.684 kb on - strand, within IAI46_11700 at 2470.738 kb on + strand, within IAI46_11700 at 2470.738 kb on + strand, within IAI46_11700 at 2470.805 kb on + strand, within IAI46_11700 at 2470.953 kb on - strand, within IAI46_11700 at 2471.301 kb on - strand, within IAI46_11705 at 2471.301 kb on - strand, within IAI46_11705 at 2471.302 kb on + strand, within IAI46_11705 at 2471.302 kb on + strand, within IAI46_11705 at 2471.304 kb on + strand, within IAI46_11705 at 2471.613 kb on - strand at 2471.672 kb on + strand, within IAI46_11710 at 2471.729 kb on - strand, within IAI46_11710 at 2471.964 kb on + strand at 2471.991 kb on + strand at 2471.992 kb on - strand at 2471.998 kb on + strand at 2471.999 kb on - strand at 2471.999 kb on - strand at 2472.052 kb on + strand at 2472.053 kb on - strand at 2472.057 kb on - strand at 2472.058 kb on + strand at 2472.108 kb on - strand at 2472.133 kb on - strand at 2472.189 kb on + strand, within IAI46_11715 at 2472.190 kb on - strand, within IAI46_11715 at 2472.194 kb on + strand, within IAI46_11715 at 2472.303 kb on + strand, within IAI46_11715 at 2472.303 kb on + strand, within IAI46_11715 at 2472.303 kb on + strand, within IAI46_11715 at 2472.303 kb on + strand, within IAI46_11715 at 2472.303 kb on + strand, within IAI46_11715 at 2472.304 kb on - strand, within IAI46_11715 at 2472.304 kb on - strand, within IAI46_11715 at 2472.306 kb on - strand, within IAI46_11715 at 2472.326 kb on + strand, within IAI46_11715 at 2472.327 kb on - strand, within IAI46_11715
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 60 uM, anaerobic remove 2,470,286 - IAI46_11700 0.39 -0.1 2,470,289 + IAI46_11700 0.39 +0.7 2,470,290 - IAI46_11700 0.40 +0.4 2,470,290 - IAI46_11700 0.40 -0.4 2,470,568 + IAI46_11700 0.58 +0.4 2,470,683 + IAI46_11700 0.66 +0.3 2,470,684 - IAI46_11700 0.66 +0.3 2,470,738 + IAI46_11700 0.70 +0.7 2,470,738 + IAI46_11700 0.70 +1.5 2,470,805 + IAI46_11700 0.74 -0.1 2,470,953 - IAI46_11700 0.84 +0.1 2,471,301 - IAI46_11705 0.26 +0.2 2,471,301 - IAI46_11705 0.26 -0.4 2,471,302 + IAI46_11705 0.26 -1.6 2,471,302 + IAI46_11705 0.26 +0.0 2,471,304 + IAI46_11705 0.27 -1.0 2,471,613 - +0.4 2,471,672 + IAI46_11710 0.17 -0.8 2,471,729 - IAI46_11710 0.32 +0.7 2,471,964 + +0.0 2,471,991 + +0.3 2,471,992 - +0.4 2,471,998 + +1.8 2,471,999 - +0.5 2,471,999 - +0.6 2,472,052 + -0.5 2,472,053 - -0.1 2,472,057 - +0.1 2,472,058 + +0.2 2,472,108 - -0.2 2,472,133 - +1.3 2,472,189 + IAI46_11715 0.19 -0.5 2,472,190 - IAI46_11715 0.19 +0.3 2,472,194 + IAI46_11715 0.20 +0.3 2,472,303 + IAI46_11715 0.54 -0.8 2,472,303 + IAI46_11715 0.54 +0.8 2,472,303 + IAI46_11715 0.54 -0.1 2,472,303 + IAI46_11715 0.54 -0.5 2,472,303 + IAI46_11715 0.54 +0.3 2,472,304 - IAI46_11715 0.54 +0.0 2,472,304 - IAI46_11715 0.54 -1.5 2,472,306 - IAI46_11715 0.54 -0.8 2,472,326 + IAI46_11715 0.61 +0.1 2,472,327 - IAI46_11715 0.61 -0.3
Or see this region's nucleotide sequence