Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS20740 and ABID97_RS20745 overlap by 4 nucleotides ABID97_RS20745 and ABID97_RS20750 overlap by 25 nucleotides
ABID97_RS20740: ABID97_RS20740 - FUSC family membrane protein, at 4,283,025 to 4,285,268
_RS20740
ABID97_RS20745: ABID97_RS20745 - mechanosensitive ion channel domain-containing protein, at 4,285,265 to 4,286,359
_RS20745
ABID97_RS20750: ABID97_RS20750 - DUF418 domain-containing protein, at 4,286,335 to 4,287,558
_RS20750
Position (kb)
4285
4286
4287 Strain fitness (log2 ratio)
-1
0
1 at 4284.276 kb on + strand, within ABID97_RS20740 at 4284.277 kb on - strand, within ABID97_RS20740 at 4284.316 kb on - strand, within ABID97_RS20740 at 4284.517 kb on - strand, within ABID97_RS20740 at 4284.657 kb on + strand, within ABID97_RS20740 at 4284.657 kb on + strand, within ABID97_RS20740 at 4284.657 kb on + strand, within ABID97_RS20740 at 4284.658 kb on - strand, within ABID97_RS20740 at 4284.658 kb on - strand, within ABID97_RS20740 at 4286.040 kb on - strand, within ABID97_RS20745 at 4286.040 kb on - strand, within ABID97_RS20745 at 4286.040 kb on - strand, within ABID97_RS20745 at 4286.588 kb on + strand, within ABID97_RS20750 at 4286.589 kb on - strand, within ABID97_RS20750 at 4286.589 kb on - strand, within ABID97_RS20750 at 4287.026 kb on + strand, within ABID97_RS20750 at 4287.027 kb on - strand, within ABID97_RS20750 at 4287.065 kb on + strand, within ABID97_RS20750 at 4287.066 kb on - strand, within ABID97_RS20750 at 4287.066 kb on - strand, within ABID97_RS20750 at 4287.185 kb on + strand, within ABID97_RS20750 at 4287.354 kb on - strand, within ABID97_RS20750
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 4,284,276 + ABID97_RS20740 0.56 -0.5 4,284,277 - ABID97_RS20740 0.56 +0.0 4,284,316 - ABID97_RS20740 0.58 -0.3 4,284,517 - ABID97_RS20740 0.66 +0.2 4,284,657 + ABID97_RS20740 0.73 +0.4 4,284,657 + ABID97_RS20740 0.73 -0.0 4,284,657 + ABID97_RS20740 0.73 +0.6 4,284,658 - ABID97_RS20740 0.73 -0.0 4,284,658 - ABID97_RS20740 0.73 -0.2 4,286,040 - ABID97_RS20745 0.71 -0.2 4,286,040 - ABID97_RS20745 0.71 -1.1 4,286,040 - ABID97_RS20745 0.71 -0.4 4,286,588 + ABID97_RS20750 0.21 -0.6 4,286,589 - ABID97_RS20750 0.21 +0.4 4,286,589 - ABID97_RS20750 0.21 +0.2 4,287,026 + ABID97_RS20750 0.56 +1.7 4,287,027 - ABID97_RS20750 0.57 -0.1 4,287,065 + ABID97_RS20750 0.60 -1.2 4,287,066 - ABID97_RS20750 0.60 -0.2 4,287,066 - ABID97_RS20750 0.60 +0.6 4,287,185 + ABID97_RS20750 0.69 -0.2 4,287,354 - ABID97_RS20750 0.83 +0.4
Or see this region's nucleotide sequence