Experiment: M63_quarter_strength
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RPSI07_RS11500 and RPSI07_RS11505 are separated by 13 nucleotides RPSI07_RS11505 and RPSI07_RS11510 are separated by 609 nucleotides
RPSI07_RS11500: RPSI07_RS11500 - two-component sensor histidine kinase, at 776,582 to 777,910
_RS11500
RPSI07_RS11505: RPSI07_RS11505 - class I SAM-dependent methyltransferase, at 777,924 to 779,327
_RS11505
RPSI07_RS11510: RPSI07_RS11510 - response regulator, at 779,937 to 780,974
_RS11510
Position (kb) 777
778
779
780 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 777.031 kb on + strand, within RPSI07_RS11500 at 777.387 kb on + strand, within RPSI07_RS11500 at 777.387 kb on + strand, within RPSI07_RS11500 at 777.387 kb on + strand, within RPSI07_RS11500 at 777.387 kb on + strand, within RPSI07_RS11500 at 777.387 kb on + strand, within RPSI07_RS11500 at 777.387 kb on + strand, within RPSI07_RS11500 at 777.391 kb on + strand, within RPSI07_RS11500 at 777.391 kb on + strand, within RPSI07_RS11500 at 777.391 kb on + strand, within RPSI07_RS11500 at 777.391 kb on + strand, within RPSI07_RS11500 at 777.391 kb on + strand, within RPSI07_RS11500 at 777.393 kb on + strand, within RPSI07_RS11500 at 777.393 kb on + strand, within RPSI07_RS11500 at 777.393 kb on + strand, within RPSI07_RS11500 at 777.393 kb on + strand, within RPSI07_RS11500 at 777.393 kb on + strand, within RPSI07_RS11500 at 777.393 kb on + strand, within RPSI07_RS11500 at 777.394 kb on - strand, within RPSI07_RS11500 at 777.504 kb on + strand, within RPSI07_RS11500 at 777.504 kb on + strand, within RPSI07_RS11500 at 777.504 kb on + strand, within RPSI07_RS11500 at 777.504 kb on + strand, within RPSI07_RS11500 at 777.504 kb on + strand, within RPSI07_RS11500 at 777.504 kb on + strand, within RPSI07_RS11500 at 777.505 kb on - strand, within RPSI07_RS11500 at 777.505 kb on - strand, within RPSI07_RS11500 at 777.505 kb on - strand, within RPSI07_RS11500 at 777.594 kb on + strand, within RPSI07_RS11500 at 777.594 kb on + strand, within RPSI07_RS11500 at 777.595 kb on - strand, within RPSI07_RS11500 at 777.618 kb on + strand, within RPSI07_RS11500 at 777.680 kb on + strand, within RPSI07_RS11500 at 777.680 kb on + strand, within RPSI07_RS11500 at 777.784 kb on - strand at 777.784 kb on - strand at 777.792 kb on + strand at 777.793 kb on - strand at 777.793 kb on - strand at 777.886 kb on - strand at 777.886 kb on - strand at 777.894 kb on + strand at 777.894 kb on + strand at 777.895 kb on - strand at 777.895 kb on - strand at 777.895 kb on - strand at 777.895 kb on - strand at 777.895 kb on - strand at 777.895 kb on - strand at 778.150 kb on + strand, within RPSI07_RS11505 at 778.151 kb on - strand, within RPSI07_RS11505 at 778.170 kb on + strand, within RPSI07_RS11505 at 778.170 kb on + strand, within RPSI07_RS11505 at 778.171 kb on - strand, within RPSI07_RS11505 at 778.187 kb on - strand, within RPSI07_RS11505 at 778.348 kb on + strand, within RPSI07_RS11505 at 778.349 kb on - strand, within RPSI07_RS11505 at 778.513 kb on + strand, within RPSI07_RS11505 at 778.513 kb on + strand, within RPSI07_RS11505 at 778.514 kb on - strand, within RPSI07_RS11505 at 778.594 kb on + strand, within RPSI07_RS11505 at 778.595 kb on - strand, within RPSI07_RS11505 at 778.658 kb on - strand, within RPSI07_RS11505 at 778.675 kb on + strand, within RPSI07_RS11505 at 778.675 kb on + strand, within RPSI07_RS11505 at 778.675 kb on + strand, within RPSI07_RS11505 at 778.676 kb on - strand, within RPSI07_RS11505 at 778.798 kb on + strand, within RPSI07_RS11505 at 778.798 kb on + strand, within RPSI07_RS11505 at 778.798 kb on + strand, within RPSI07_RS11505 at 778.798 kb on + strand, within RPSI07_RS11505 at 778.798 kb on + strand, within RPSI07_RS11505 at 778.799 kb on - strand, within RPSI07_RS11505 at 778.813 kb on + strand, within RPSI07_RS11505 at 778.813 kb on + strand, within RPSI07_RS11505 at 778.814 kb on - strand, within RPSI07_RS11505 at 778.814 kb on - strand, within RPSI07_RS11505 at 778.960 kb on + strand, within RPSI07_RS11505 at 778.961 kb on - strand, within RPSI07_RS11505 at 779.141 kb on - strand, within RPSI07_RS11505 at 779.207 kb on - strand at 779.207 kb on - strand at 779.207 kb on - strand at 779.207 kb on - strand at 779.207 kb on - strand at 779.215 kb on + strand at 779.215 kb on + strand at 779.216 kb on - strand at 779.323 kb on + strand at 779.323 kb on + strand at 779.323 kb on + strand at 779.323 kb on + strand at 779.324 kb on - strand at 779.324 kb on - strand at 779.468 kb on + strand at 779.468 kb on + strand at 779.615 kb on + strand at 779.665 kb on - strand at 779.741 kb on + strand at 779.741 kb on + strand at 779.741 kb on + strand at 779.741 kb on + strand at 779.742 kb on - strand at 779.742 kb on - strand at 779.760 kb on + strand at 779.760 kb on + strand at 779.760 kb on + strand at 779.760 kb on + strand at 779.760 kb on + strand at 779.760 kb on + strand at 779.761 kb on - strand at 779.761 kb on - strand at 779.761 kb on - strand at 779.873 kb on + strand at 779.874 kb on - strand at 779.874 kb on - strand at 779.874 kb on - strand at 779.980 kb on + strand at 779.981 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M63_quarter_strength remove 777,031 + RPSI07_RS11500 0.34 +1.9 777,387 + RPSI07_RS11500 0.61 +2.6 777,387 + RPSI07_RS11500 0.61 +0.6 777,387 + RPSI07_RS11500 0.61 +2.2 777,387 + RPSI07_RS11500 0.61 +2.7 777,387 + RPSI07_RS11500 0.61 +2.0 777,387 + RPSI07_RS11500 0.61 +2.3 777,391 + RPSI07_RS11500 0.61 +1.3 777,391 + RPSI07_RS11500 0.61 +2.2 777,391 + RPSI07_RS11500 0.61 +2.3 777,391 + RPSI07_RS11500 0.61 +2.2 777,391 + RPSI07_RS11500 0.61 +1.8 777,393 + RPSI07_RS11500 0.61 +2.1 777,393 + RPSI07_RS11500 0.61 +2.3 777,393 + RPSI07_RS11500 0.61 +2.2 777,393 + RPSI07_RS11500 0.61 +2.3 777,393 + RPSI07_RS11500 0.61 +2.4 777,393 + RPSI07_RS11500 0.61 +1.4 777,394 - RPSI07_RS11500 0.61 -0.2 777,504 + RPSI07_RS11500 0.69 +2.5 777,504 + RPSI07_RS11500 0.69 +2.1 777,504 + RPSI07_RS11500 0.69 +2.4 777,504 + RPSI07_RS11500 0.69 +2.0 777,504 + RPSI07_RS11500 0.69 +1.2 777,504 + RPSI07_RS11500 0.69 +2.2 777,505 - RPSI07_RS11500 0.69 +3.8 777,505 - RPSI07_RS11500 0.69 +3.2 777,505 - RPSI07_RS11500 0.69 +3.7 777,594 + RPSI07_RS11500 0.76 +2.6 777,594 + RPSI07_RS11500 0.76 +2.0 777,595 - RPSI07_RS11500 0.76 +2.8 777,618 + RPSI07_RS11500 0.78 +2.2 777,680 + RPSI07_RS11500 0.83 +5.0 777,680 + RPSI07_RS11500 0.83 +4.9 777,784 - +3.4 777,784 - +0.9 777,792 + +2.6 777,793 - +3.3 777,793 - +3.8 777,886 - +4.5 777,886 - +0.2 777,894 + +1.6 777,894 + +2.2 777,895 - +0.9 777,895 - +3.9 777,895 - +1.0 777,895 - +3.1 777,895 - +0.3 777,895 - +2.3 778,150 + RPSI07_RS11505 0.16 +1.2 778,151 - RPSI07_RS11505 0.16 +0.7 778,170 + RPSI07_RS11505 0.18 +2.1 778,170 + RPSI07_RS11505 0.18 +1.9 778,171 - RPSI07_RS11505 0.18 +0.6 778,187 - RPSI07_RS11505 0.19 +0.9 778,348 + RPSI07_RS11505 0.30 +2.3 778,349 - RPSI07_RS11505 0.30 +1.3 778,513 + RPSI07_RS11505 0.42 +3.3 778,513 + RPSI07_RS11505 0.42 +2.0 778,514 - RPSI07_RS11505 0.42 +0.5 778,594 + RPSI07_RS11505 0.48 +2.0 778,595 - RPSI07_RS11505 0.48 -0.4 778,658 - RPSI07_RS11505 0.52 -0.6 778,675 + RPSI07_RS11505 0.53 +2.1 778,675 + RPSI07_RS11505 0.53 +4.5 778,675 + RPSI07_RS11505 0.53 +3.7 778,676 - RPSI07_RS11505 0.54 +0.6 778,798 + RPSI07_RS11505 0.62 +2.2 778,798 + RPSI07_RS11505 0.62 +2.8 778,798 + RPSI07_RS11505 0.62 +2.9 778,798 + RPSI07_RS11505 0.62 +1.7 778,798 + RPSI07_RS11505 0.62 +1.8 778,799 - RPSI07_RS11505 0.62 -1.3 778,813 + RPSI07_RS11505 0.63 +2.5 778,813 + RPSI07_RS11505 0.63 +2.7 778,814 - RPSI07_RS11505 0.63 +1.5 778,814 - RPSI07_RS11505 0.63 +2.2 778,960 + RPSI07_RS11505 0.74 +1.7 778,961 - RPSI07_RS11505 0.74 +1.3 779,141 - RPSI07_RS11505 0.87 -0.2 779,207 - +3.2 779,207 - -0.7 779,207 - -0.7 779,207 - +0.7 779,207 - +0.7 779,215 + +3.1 779,215 + +0.4 779,216 - +0.5 779,323 + +2.5 779,323 + +2.3 779,323 + +2.3 779,323 + +2.9 779,324 - -1.0 779,324 - +0.7 779,468 + +1.9 779,468 + +3.6 779,615 + +0.9 779,665 - +0.8 779,741 + +3.2 779,741 + +0.9 779,741 + -0.3 779,741 + +1.6 779,742 - -0.5 779,742 - +1.3 779,760 + +2.3 779,760 + +2.7 779,760 + +2.0 779,760 + +2.7 779,760 + +2.1 779,760 + +2.9 779,761 - +0.0 779,761 - -0.4 779,761 - -0.0 779,873 + +0.4 779,874 - -0.7 779,874 - +1.4 779,874 - -1.2 779,980 + -2.1 779,981 - +1.0
Or see this region's nucleotide sequence