Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS15480

Experiment: Adenosine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Adenosine (C)
3,057,482	+				+2.1
3,057,482	+				-2.5
3,057,483	-				+0.9
3,057,483	-				-0.3
3,057,483	-				+1.0
3,057,631	-				-0.6
3,057,631	-				+0.9
3,057,696	+				+0.6
3,057,696	+				+0.6
3,057,696	+				+0.4
3,057,696	+				-0.8
3,057,697	-				-1.9
3,057,698	+				-0.9
3,057,698	+				-2.1
3,057,698	+				-0.7
3,057,698	+				+1.7
3,057,699	-				+0.2
3,057,699	-				-0.1
3,057,699	-				+0.1
3,057,699	-				+1.5
3,057,699	-				+0.2
3,057,860	-		ABIE40_RS15470	0.43	+2.1
3,057,860	-		ABIE40_RS15470	0.43	+1.0
3,057,938	+		ABIE40_RS15470	0.65	+1.0
3,057,939	-		ABIE40_RS15470	0.66	-0.0
3,058,004	-		ABIE40_RS15470	0.84	-0.4
3,058,143	+				-0.2
3,058,144	-				+1.0
3,058,147	-		ABIE40_RS15475	0.10	-1.0
3,058,356	+				-0.8
3,058,357	-				-1.4
3,058,395	+				-0.6
3,058,395	+				-0.5
3,058,396	-				+2.2
3,058,412	+				+0.2
3,058,413	-				+0.4
3,058,413	-				-0.8
3,058,500	+				-1.5
3,058,500	+				+1.3
3,058,500	+				-1.0
3,058,500	+				-0.1
3,058,500	+				-0.4
3,058,500	+				-0.3
3,058,500	+				-0.2
3,058,501	-				-1.2
3,058,501	-				-1.6
3,058,501	-				+1.2
3,058,501	-				+0.8
3,058,501	-				+0.4
3,058,676	-		ABIE40_RS15480	0.17	-2.2
3,058,676	-		ABIE40_RS15480	0.17	+0.5
3,058,713	+		ABIE40_RS15480	0.20	+0.7
3,058,713	+		ABIE40_RS15480	0.20	-1.1
3,058,714	-		ABIE40_RS15480	0.20	+0.1
3,058,714	-		ABIE40_RS15480	0.20	+0.1
3,058,714	-		ABIE40_RS15480	0.20	+0.7
3,058,714	-		ABIE40_RS15480	0.20	+0.5
3,058,846	+		ABIE40_RS15480	0.30	-0.2
3,058,847	-		ABIE40_RS15480	0.30	+0.4
3,058,887	+		ABIE40_RS15480	0.34	-0.7
3,058,887	+		ABIE40_RS15480	0.34	+0.5
3,058,887	+		ABIE40_RS15480	0.34	-1.3
3,058,887	+		ABIE40_RS15480	0.34	+0.5
3,058,887	+		ABIE40_RS15480	0.34	+0.7
3,058,887	+		ABIE40_RS15480	0.34	-0.1
3,058,887	+		ABIE40_RS15480	0.34	+0.3
3,058,887	+		ABIE40_RS15480	0.34	-0.1
3,058,888	-		ABIE40_RS15480	0.34	+0.7
3,058,888	-		ABIE40_RS15480	0.34	+1.9
3,058,888	-		ABIE40_RS15480	0.34	+1.0
3,058,981	+		ABIE40_RS15480	0.41	-0.0
3,058,981	+		ABIE40_RS15480	0.41	-0.5
3,058,981	+		ABIE40_RS15480	0.41	-1.3
3,059,067	+		ABIE40_RS15480	0.47	+1.5
3,059,068	-		ABIE40_RS15480	0.47	+0.2
3,059,158	+		ABIE40_RS15480	0.54	-0.2
3,059,158	+		ABIE40_RS15480	0.54	-1.3
3,059,158	+		ABIE40_RS15480	0.54	+0.9
3,059,158	+		ABIE40_RS15480	0.54	+1.5
3,059,158	+		ABIE40_RS15480	0.54	-0.0
3,059,159	-		ABIE40_RS15480	0.55	+0.5
3,059,159	-		ABIE40_RS15480	0.55	+1.3
3,059,159	-		ABIE40_RS15480	0.55	-1.0
3,059,159	-		ABIE40_RS15480	0.55	+1.4
3,059,159	-		ABIE40_RS15480	0.55	+0.1
3,059,159	-		ABIE40_RS15480	0.55	-0.6
3,059,159	-		ABIE40_RS15480	0.55	+1.0
3,059,160	+		ABIE40_RS15480	0.55	-0.9
3,059,235	+		ABIE40_RS15480	0.60	+1.8
3,059,235	+		ABIE40_RS15480	0.60	-0.9
3,059,235	+		ABIE40_RS15480	0.60	-1.8
3,059,235	+		ABIE40_RS15480	0.60	-0.5
3,059,235	+		ABIE40_RS15480	0.60	-0.3
3,059,236	-		ABIE40_RS15480	0.60	+0.8
3,059,236	-		ABIE40_RS15480	0.60	+1.5
3,059,236	-		ABIE40_RS15480	0.60	+0.3
3,059,236	-		ABIE40_RS15480	0.60	+2.4
3,059,238	+		ABIE40_RS15480	0.61	-0.1
3,059,238	+		ABIE40_RS15480	0.61	+0.4
3,059,238	+		ABIE40_RS15480	0.61	-1.9
3,059,238	+		ABIE40_RS15480	0.61	-1.5
3,059,238	+		ABIE40_RS15480	0.61	+0.1
3,059,238	+		ABIE40_RS15480	0.61	+0.9
3,059,238	+		ABIE40_RS15480	0.61	+0.2
3,059,272	+		ABIE40_RS15480	0.63	-0.9
3,059,272	+		ABIE40_RS15480	0.63	+0.2
3,059,273	-		ABIE40_RS15480	0.63	+1.5
3,059,273	-		ABIE40_RS15480	0.63	-1.5
3,059,273	-		ABIE40_RS15480	0.63	-0.1
3,059,273	-		ABIE40_RS15480	0.63	+0.5
3,059,273	-		ABIE40_RS15480	0.63	+0.2
3,059,273	-		ABIE40_RS15480	0.63	+1.7
3,059,273	-		ABIE40_RS15480	0.63	-0.4
3,059,280	+		ABIE40_RS15480	0.64	+1.2
3,059,281	-		ABIE40_RS15480	0.64	-0.2
3,059,281	-		ABIE40_RS15480	0.64	-0.7
3,059,330	-		ABIE40_RS15480	0.68	+2.9
3,059,424	+		ABIE40_RS15480	0.75	+1.3
3,059,424	+		ABIE40_RS15480	0.75	-0.2
3,059,424	+		ABIE40_RS15480	0.75	+0.2
3,059,425	-		ABIE40_RS15480	0.75	-0.7
3,059,425	-		ABIE40_RS15480	0.75	+0.1
3,059,425	-		ABIE40_RS15480	0.75	+0.7
3,059,425	-		ABIE40_RS15480	0.75	+1.0
3,059,425	-		ABIE40_RS15480	0.75	-0.0
3,059,467	+		ABIE40_RS15480	0.78	+0.1
3,059,467	+		ABIE40_RS15480	0.78	-0.3
3,059,467	+		ABIE40_RS15480	0.78	-0.4
3,059,468	-		ABIE40_RS15480	0.78	-0.8
3,059,468	-		ABIE40_RS15480	0.78	-0.9
3,059,468	-		ABIE40_RS15480	0.78	+1.6
3,059,468	-		ABIE40_RS15480	0.78	-0.3
3,059,468	-		ABIE40_RS15480	0.78	-1.2
3,059,468	-		ABIE40_RS15480	0.78	-0.3
3,059,468	-		ABIE40_RS15480	0.78	+0.1
3,059,539	-		ABIE40_RS15480	0.84	+0.1
3,059,539	-		ABIE40_RS15480	0.84	-0.4
3,059,539	-		ABIE40_RS15480	0.84	+1.1
3,059,539	-		ABIE40_RS15480	0.84	+0.3
3,059,569	-		ABIE40_RS15480	0.86	-0.0
3,059,569	-		ABIE40_RS15480	0.86	+0.7
3,059,673	+				-0.2
3,059,673	+				+0.3
3,059,673	+				+0.6
3,059,673	+				+0.6
3,059,673	+				+0.1
3,059,673	+				+0.7
3,059,673	+				-1.0
3,059,674	-				-0.6
3,059,674	-				+1.5
3,059,674	-				-0.0
3,059,674	-				+0.0
3,059,674	-				-0.7
3,059,876	+				+0.4
3,059,877	-				-0.0
3,059,877	-				+2.5
3,059,939	+		ABIE40_RS15485	0.12	+0.3
3,059,939	+		ABIE40_RS15485	0.12	-1.0
3,059,940	-		ABIE40_RS15485	0.12	-1.3
3,059,944	+		ABIE40_RS15485	0.12	-0.5
3,059,945	-		ABIE40_RS15485	0.13	+0.7
3,059,945	-		ABIE40_RS15485	0.13	+0.6
3,059,970	+		ABIE40_RS15485	0.14	+0.1
3,059,978	+		ABIE40_RS15485	0.15	+1.0
3,059,978	+		ABIE40_RS15485	0.15	-2.5
3,059,978	+		ABIE40_RS15485	0.15	+0.4
3,059,979	-		ABIE40_RS15485	0.15	-0.3
3,059,979	-		ABIE40_RS15485	0.15	+1.4
3,060,027	+		ABIE40_RS15485	0.18	-0.5
3,060,028	-		ABIE40_RS15485	0.18	+0.7
3,060,029	+		ABIE40_RS15485	0.18	+0.3
3,060,029	+		ABIE40_RS15485	0.18	-1.9
3,060,029	+		ABIE40_RS15485	0.18	-1.0
3,060,029	+		ABIE40_RS15485	0.18	+0.9
3,060,030	-		ABIE40_RS15485	0.18	+2.3
3,060,030	-		ABIE40_RS15485	0.18	-0.5
3,060,179	+		ABIE40_RS15485	0.27	+0.7
3,060,179	+		ABIE40_RS15485	0.27	+0.8
3,060,179	+		ABIE40_RS15485	0.27	-1.3
3,060,179	+		ABIE40_RS15485	0.27	-0.2
3,060,179	+		ABIE40_RS15485	0.27	-1.3
3,060,179	+		ABIE40_RS15485	0.27	-0.3
3,060,180	-		ABIE40_RS15485	0.27	+0.0
3,060,180	-		ABIE40_RS15485	0.27	+0.8
3,060,180	-		ABIE40_RS15485	0.27	+0.7
3,060,180	-		ABIE40_RS15485	0.27	+0.5
3,060,180	-		ABIE40_RS15485	0.27	-2.3
3,060,180	-		ABIE40_RS15485	0.27	-1.2
3,060,180	-		ABIE40_RS15485	0.27	-0.3
3,060,180	-		ABIE40_RS15485	0.27	+0.5
3,060,228	+		ABIE40_RS15485	0.30	+0.6
3,060,228	+		ABIE40_RS15485	0.30	+0.5
3,060,228	+		ABIE40_RS15485	0.30	+0.0
3,060,228	+		ABIE40_RS15485	0.30	+0.5
3,060,229	-		ABIE40_RS15485	0.30	+0.2
3,060,229	-		ABIE40_RS15485	0.30	+0.3
3,060,229	-		ABIE40_RS15485	0.30	+0.7
3,060,229	-		ABIE40_RS15485	0.30	+0.8
3,060,229	-		ABIE40_RS15485	0.30	+0.2
3,060,285	-		ABIE40_RS15485	0.34	-1.3
3,060,350	+		ABIE40_RS15485	0.38	+0.7
3,060,350	+		ABIE40_RS15485	0.38	+0.8
3,060,350	+		ABIE40_RS15485	0.38	+1.0
3,060,351	-		ABIE40_RS15485	0.38	-0.9
3,060,351	-		ABIE40_RS15485	0.38	-0.6
3,060,368	+		ABIE40_RS15485	0.39	+0.5
3,060,368	+		ABIE40_RS15485	0.39	+0.2
3,060,369	-		ABIE40_RS15485	0.39	-0.9
3,060,369	-		ABIE40_RS15485	0.39	-0.0
3,060,374	+		ABIE40_RS15485	0.40	+0.2
3,060,374	+		ABIE40_RS15485	0.40	+0.5
3,060,374	+		ABIE40_RS15485	0.40	-2.4
3,060,374	+		ABIE40_RS15485	0.40	+0.4
3,060,375	-		ABIE40_RS15485	0.40	-2.5
3,060,375	-		ABIE40_RS15485	0.40	-0.4
3,060,375	-		ABIE40_RS15485	0.40	+1.4
3,060,375	-		ABIE40_RS15485	0.40	-0.0
3,060,375	-		ABIE40_RS15485	0.40	-0.3
3,060,375	-		ABIE40_RS15485	0.40	-0.3