Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS07650 and ABID97_RS07655 overlap by 4 nucleotides ABID97_RS07655 and ABID97_RS07660 overlap by 58 nucleotides ABID97_RS07660 and ABID97_RS07665 are separated by 10 nucleotides ABID97_RS07665 and ABID97_RS07670 overlap by 4 nucleotides
ABID97_RS07650: ABID97_RS07650 - HAD family phosphatase, at 1,616,016 to 1,616,696
_RS07650
ABID97_RS07655: ABID97_RS07655 - hypothetical protein, at 1,616,693 to 1,617,028
_RS07655
ABID97_RS07660: ABID97_RS07660 - isopenicillin N synthase family oxygenase, at 1,616,971 to 1,617,981
_RS07660
ABID97_RS07665: ABID97_RS07665 - amino acid ABC transporter ATP-binding protein, at 1,617,992 to 1,618,735
_RS07665
ABID97_RS07670: ABID97_RS07670 - amino acid ABC transporter permease, at 1,618,732 to 1,619,454
_RS07670
Position (kb) 1616
1617
1618 Strain fitness (log2 ratio) -1
0
1
2
3 at 1616.004 kb on + strand at 1616.004 kb on + strand at 1616.005 kb on - strand at 1616.133 kb on + strand, within ABID97_RS07650 at 1616.133 kb on + strand, within ABID97_RS07650 at 1616.134 kb on - strand, within ABID97_RS07650 at 1616.209 kb on - strand, within ABID97_RS07650 at 1616.209 kb on - strand, within ABID97_RS07650 at 1616.816 kb on + strand, within ABID97_RS07655 at 1616.831 kb on + strand, within ABID97_RS07655 at 1616.832 kb on - strand, within ABID97_RS07655 at 1616.832 kb on - strand, within ABID97_RS07655 at 1616.834 kb on + strand, within ABID97_RS07655 at 1616.864 kb on + strand, within ABID97_RS07655 at 1616.864 kb on + strand, within ABID97_RS07655 at 1616.864 kb on + strand, within ABID97_RS07655 at 1616.865 kb on - strand, within ABID97_RS07655 at 1617.026 kb on + strand at 1617.027 kb on - strand at 1617.027 kb on - strand at 1617.365 kb on + strand, within ABID97_RS07660 at 1617.428 kb on + strand, within ABID97_RS07660 at 1617.558 kb on - strand, within ABID97_RS07660 at 1617.669 kb on - strand, within ABID97_RS07660 at 1617.669 kb on - strand, within ABID97_RS07660 at 1617.669 kb on - strand, within ABID97_RS07660 at 1617.726 kb on - strand, within ABID97_RS07660 at 1617.858 kb on - strand, within ABID97_RS07660 at 1617.858 kb on - strand, within ABID97_RS07660 at 1617.858 kb on - strand, within ABID97_RS07660 at 1618.579 kb on + strand, within ABID97_RS07665 at 1618.695 kb on + strand at 1618.695 kb on + strand at 1618.695 kb on + strand at 1618.696 kb on - strand at 1618.696 kb on - strand at 1618.808 kb on + strand, within ABID97_RS07670 at 1618.844 kb on + strand, within ABID97_RS07670 at 1618.845 kb on - strand, within ABID97_RS07670 at 1618.865 kb on + strand, within ABID97_RS07670 at 1618.865 kb on + strand, within ABID97_RS07670 at 1618.866 kb on - strand, within ABID97_RS07670 at 1618.944 kb on - strand, within ABID97_RS07670 at 1618.944 kb on - strand, within ABID97_RS07670
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 1,616,004 + -0.0 1,616,004 + -0.1 1,616,005 - -0.3 1,616,133 + ABID97_RS07650 0.17 -1.5 1,616,133 + ABID97_RS07650 0.17 +1.8 1,616,134 - ABID97_RS07650 0.17 -1.0 1,616,209 - ABID97_RS07650 0.28 -1.3 1,616,209 - ABID97_RS07650 0.28 -0.6 1,616,816 + ABID97_RS07655 0.37 -0.4 1,616,831 + ABID97_RS07655 0.41 +0.1 1,616,832 - ABID97_RS07655 0.41 +0.3 1,616,832 - ABID97_RS07655 0.41 -0.1 1,616,834 + ABID97_RS07655 0.42 +0.3 1,616,864 + ABID97_RS07655 0.51 +0.2 1,616,864 + ABID97_RS07655 0.51 -0.9 1,616,864 + ABID97_RS07655 0.51 -0.6 1,616,865 - ABID97_RS07655 0.51 -0.2 1,617,026 + +0.0 1,617,027 - +0.1 1,617,027 - +1.4 1,617,365 + ABID97_RS07660 0.39 -0.0 1,617,428 + ABID97_RS07660 0.45 -0.1 1,617,558 - ABID97_RS07660 0.58 -0.1 1,617,669 - ABID97_RS07660 0.69 -1.0 1,617,669 - ABID97_RS07660 0.69 -0.8 1,617,669 - ABID97_RS07660 0.69 -0.2 1,617,726 - ABID97_RS07660 0.75 -0.7 1,617,858 - ABID97_RS07660 0.88 +0.0 1,617,858 - ABID97_RS07660 0.88 +0.2 1,617,858 - ABID97_RS07660 0.88 -0.2 1,618,579 + ABID97_RS07665 0.79 +0.2 1,618,695 + -0.0 1,618,695 + +0.2 1,618,695 + -0.1 1,618,696 - +0.8 1,618,696 - +0.0 1,618,808 + ABID97_RS07670 0.11 +0.2 1,618,844 + ABID97_RS07670 0.15 +0.7 1,618,845 - ABID97_RS07670 0.16 -0.1 1,618,865 + ABID97_RS07670 0.18 +2.8 1,618,865 + ABID97_RS07670 0.18 +0.1 1,618,866 - ABID97_RS07670 0.19 +0.3 1,618,944 - ABID97_RS07670 0.29 +0.1 1,618,944 - ABID97_RS07670 0.29 -0.3
Or see this region's nucleotide sequence