Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1756 and EX28DRAFT_1757 overlap by 1 nucleotides EX28DRAFT_1757 and EX28DRAFT_1758 are separated by 73 nucleotides EX28DRAFT_1758 and EX28DRAFT_1759 overlap by 4 nucleotides EX28DRAFT_1759 and EX28DRAFT_1760 overlap by 8 nucleotides
EX28DRAFT_1756: EX28DRAFT_1756 - ABC-type uncharacterized transport system, permease component, at 1,771,373 to 1,772,902
_1756
EX28DRAFT_1757: EX28DRAFT_1757 - ABC-type uncharacterized transport system, ATPase component, at 1,772,902 to 1,773,522
_1757
EX28DRAFT_1758: EX28DRAFT_1758 - Rhodanese-related sulfurtransferase, at 1,773,596 to 1,774,903
_1758
EX28DRAFT_1759: EX28DRAFT_1759 - Phosphatidylglycerophosphate synthase, at 1,774,900 to 1,775,517
_1759
EX28DRAFT_1760: EX28DRAFT_1760 - Uncharacterized conserved protein, at 1,775,510 to 1,776,079
_1760
Position (kb)
1773
1774
1775 Strain fitness (log2 ratio)
-1
0
1 at 1772.631 kb on + strand, within EX28DRAFT_1756 at 1772.708 kb on + strand, within EX28DRAFT_1756 at 1772.708 kb on + strand, within EX28DRAFT_1756 at 1772.708 kb on + strand, within EX28DRAFT_1756 at 1772.709 kb on - strand, within EX28DRAFT_1756 at 1772.820 kb on + strand at 1772.912 kb on + strand at 1773.416 kb on + strand, within EX28DRAFT_1757 at 1773.417 kb on - strand, within EX28DRAFT_1757 at 1773.417 kb on - strand, within EX28DRAFT_1757 at 1773.576 kb on + strand at 1773.577 kb on - strand at 1773.747 kb on - strand, within EX28DRAFT_1758 at 1773.747 kb on - strand, within EX28DRAFT_1758 at 1773.747 kb on - strand, within EX28DRAFT_1758 at 1773.874 kb on + strand, within EX28DRAFT_1758 at 1773.875 kb on - strand, within EX28DRAFT_1758 at 1773.875 kb on - strand, within EX28DRAFT_1758 at 1774.207 kb on + strand, within EX28DRAFT_1758 at 1774.328 kb on + strand, within EX28DRAFT_1758 at 1774.347 kb on + strand, within EX28DRAFT_1758 at 1774.347 kb on + strand, within EX28DRAFT_1758 at 1774.577 kb on + strand, within EX28DRAFT_1758 at 1774.780 kb on + strand at 1774.784 kb on + strand at 1774.784 kb on + strand at 1774.785 kb on - strand at 1774.785 kb on - strand at 1774.785 kb on - strand at 1774.820 kb on + strand at 1774.928 kb on + strand at 1774.929 kb on - strand at 1774.996 kb on - strand, within EX28DRAFT_1759 at 1775.069 kb on + strand, within EX28DRAFT_1759 at 1775.069 kb on + strand, within EX28DRAFT_1759 at 1775.240 kb on + strand, within EX28DRAFT_1759 at 1775.240 kb on + strand, within EX28DRAFT_1759 at 1775.241 kb on - strand, within EX28DRAFT_1759 at 1775.451 kb on + strand, within EX28DRAFT_1759 at 1775.576 kb on - strand, within EX28DRAFT_1760 at 1775.779 kb on + strand, within EX28DRAFT_1760
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 1,772,631 + EX28DRAFT_1756 0.82 -0.4 1,772,708 + EX28DRAFT_1756 0.87 -0.2 1,772,708 + EX28DRAFT_1756 0.87 +1.2 1,772,708 + EX28DRAFT_1756 0.87 +0.1 1,772,709 - EX28DRAFT_1756 0.87 +0.0 1,772,820 + -0.5 1,772,912 + +0.9 1,773,416 + EX28DRAFT_1757 0.83 +0.1 1,773,417 - EX28DRAFT_1757 0.83 -1.4 1,773,417 - EX28DRAFT_1757 0.83 -0.2 1,773,576 + +0.1 1,773,577 - -0.7 1,773,747 - EX28DRAFT_1758 0.12 +0.2 1,773,747 - EX28DRAFT_1758 0.12 -0.3 1,773,747 - EX28DRAFT_1758 0.12 -0.1 1,773,874 + EX28DRAFT_1758 0.21 +0.1 1,773,875 - EX28DRAFT_1758 0.21 -0.4 1,773,875 - EX28DRAFT_1758 0.21 +0.1 1,774,207 + EX28DRAFT_1758 0.47 +0.5 1,774,328 + EX28DRAFT_1758 0.56 +0.2 1,774,347 + EX28DRAFT_1758 0.57 +0.6 1,774,347 + EX28DRAFT_1758 0.57 +0.6 1,774,577 + EX28DRAFT_1758 0.75 +1.1 1,774,780 + -0.6 1,774,784 + +0.4 1,774,784 + +0.2 1,774,785 - -0.9 1,774,785 - +0.6 1,774,785 - -0.6 1,774,820 + -0.3 1,774,928 + +0.3 1,774,929 - +0.3 1,774,996 - EX28DRAFT_1759 0.16 +1.7 1,775,069 + EX28DRAFT_1759 0.27 -0.2 1,775,069 + EX28DRAFT_1759 0.27 -0.2 1,775,240 + EX28DRAFT_1759 0.55 -0.6 1,775,240 + EX28DRAFT_1759 0.55 -0.6 1,775,241 - EX28DRAFT_1759 0.55 -0.1 1,775,451 + EX28DRAFT_1759 0.89 +0.0 1,775,576 - EX28DRAFT_1760 0.12 +0.2 1,775,779 + EX28DRAFT_1760 0.47 +0.3
Or see this region's nucleotide sequence