Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1569 and EX28DRAFT_1570 overlap by 1 nucleotides EX28DRAFT_1570 and EX28DRAFT_1571 are separated by 36 nucleotides EX28DRAFT_1571 and EX28DRAFT_1572 are separated by 2 nucleotides EX28DRAFT_1572 and EX28DRAFT_1573 are separated by 11 nucleotides EX28DRAFT_1573 and EX28DRAFT_1574 are separated by 80 nucleotides
EX28DRAFT_1569: EX28DRAFT_1569 - hypothetical protein, at 1,584,963 to 1,585,313
_1569
EX28DRAFT_1570: EX28DRAFT_1570 - hypothetical protein, at 1,585,313 to 1,585,795
_1570
EX28DRAFT_1571: EX28DRAFT_1571 - Bacterial Ig-like domain (group 1), at 1,585,832 to 1,586,110
_1571
EX28DRAFT_1572: EX28DRAFT_1572 - hypothetical protein, at 1,586,113 to 1,587,066
_1572
EX28DRAFT_1573: EX28DRAFT_1573 - hypothetical protein, at 1,587,078 to 1,587,848
_1573
EX28DRAFT_1574: EX28DRAFT_1574 - Phage Mu protein F like protein, at 1,587,929 to 1,589,026
_1574
Position (kb)
1586
1587
1588 Strain fitness (log2 ratio)
-1
0
1
2 at 1585.246 kb on + strand, within EX28DRAFT_1569 at 1585.246 kb on + strand, within EX28DRAFT_1569 at 1585.247 kb on - strand, within EX28DRAFT_1569 at 1585.271 kb on + strand, within EX28DRAFT_1569 at 1585.271 kb on + strand, within EX28DRAFT_1569 at 1585.271 kb on + strand, within EX28DRAFT_1569 at 1585.333 kb on + strand at 1585.334 kb on - strand at 1585.345 kb on - strand at 1585.345 kb on - strand at 1585.429 kb on - strand, within EX28DRAFT_1570 at 1585.429 kb on - strand, within EX28DRAFT_1570 at 1585.540 kb on + strand, within EX28DRAFT_1570 at 1585.641 kb on - strand, within EX28DRAFT_1570 at 1585.789 kb on + strand at 1585.790 kb on - strand at 1586.139 kb on + strand at 1586.324 kb on + strand, within EX28DRAFT_1572 at 1586.325 kb on - strand, within EX28DRAFT_1572 at 1586.517 kb on - strand, within EX28DRAFT_1572 at 1586.517 kb on - strand, within EX28DRAFT_1572 at 1586.684 kb on + strand, within EX28DRAFT_1572 at 1586.722 kb on + strand, within EX28DRAFT_1572 at 1586.793 kb on - strand, within EX28DRAFT_1572 at 1586.900 kb on + strand, within EX28DRAFT_1572 at 1586.900 kb on + strand, within EX28DRAFT_1572 at 1586.900 kb on + strand, within EX28DRAFT_1572 at 1587.033 kb on - strand at 1587.051 kb on + strand at 1587.051 kb on + strand at 1587.051 kb on + strand at 1587.052 kb on - strand at 1587.060 kb on + strand at 1587.060 kb on + strand at 1587.060 kb on + strand at 1587.072 kb on - strand at 1587.124 kb on + strand at 1587.125 kb on - strand at 1587.678 kb on - strand, within EX28DRAFT_1573 at 1587.917 kb on - strand at 1587.917 kb on - strand at 1588.000 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 1,585,246 + EX28DRAFT_1569 0.81 -1.0 1,585,246 + EX28DRAFT_1569 0.81 +0.6 1,585,247 - EX28DRAFT_1569 0.81 +0.7 1,585,271 + EX28DRAFT_1569 0.88 +0.7 1,585,271 + EX28DRAFT_1569 0.88 -0.1 1,585,271 + EX28DRAFT_1569 0.88 +0.2 1,585,333 + +0.7 1,585,334 - -0.2 1,585,345 - -0.5 1,585,345 - -0.7 1,585,429 - EX28DRAFT_1570 0.24 -0.1 1,585,429 - EX28DRAFT_1570 0.24 +0.4 1,585,540 + EX28DRAFT_1570 0.47 -0.1 1,585,641 - EX28DRAFT_1570 0.68 -0.2 1,585,789 + +0.3 1,585,790 - +0.3 1,586,139 + +0.5 1,586,324 + EX28DRAFT_1572 0.22 +0.6 1,586,325 - EX28DRAFT_1572 0.22 -0.3 1,586,517 - EX28DRAFT_1572 0.42 +0.1 1,586,517 - EX28DRAFT_1572 0.42 +0.2 1,586,684 + EX28DRAFT_1572 0.60 -0.4 1,586,722 + EX28DRAFT_1572 0.64 +0.3 1,586,793 - EX28DRAFT_1572 0.71 +0.3 1,586,900 + EX28DRAFT_1572 0.82 +0.3 1,586,900 + EX28DRAFT_1572 0.82 +2.4 1,586,900 + EX28DRAFT_1572 0.82 +0.1 1,587,033 - +0.8 1,587,051 + +1.0 1,587,051 + +0.1 1,587,051 + +0.6 1,587,052 - -0.2 1,587,060 + +0.5 1,587,060 + -0.4 1,587,060 + +0.1 1,587,072 - +0.6 1,587,124 + +0.6 1,587,125 - +0.3 1,587,678 - EX28DRAFT_1573 0.78 -0.4 1,587,917 - -0.0 1,587,917 - +0.1 1,588,000 - -0.3
Or see this region's nucleotide sequence