Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1463 and EX28DRAFT_1464 are separated by 93 nucleotides EX28DRAFT_1464 and EX28DRAFT_1465 are separated by 40 nucleotides
EX28DRAFT_1463: EX28DRAFT_1463 - anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family, at 1,475,089 to 1,477,527
_1463
EX28DRAFT_1464: EX28DRAFT_1464 - Uncharacterized component of anaerobic dehydrogenases, at 1,477,621 to 1,478,235
_1464
EX28DRAFT_1465: EX28DRAFT_1465 - Sulfate permease and related transporters (MFS superfamily), at 1,478,276 to 1,479,991
_1465
Position (kb)
1477
1478
1479 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1476.634 kb on + strand, within EX28DRAFT_1463 at 1476.635 kb on - strand, within EX28DRAFT_1463 at 1476.760 kb on - strand, within EX28DRAFT_1463 at 1476.766 kb on - strand, within EX28DRAFT_1463 at 1476.769 kb on + strand, within EX28DRAFT_1463 at 1476.905 kb on - strand, within EX28DRAFT_1463 at 1476.931 kb on + strand, within EX28DRAFT_1463 at 1476.931 kb on + strand, within EX28DRAFT_1463 at 1476.932 kb on - strand, within EX28DRAFT_1463 at 1476.932 kb on - strand, within EX28DRAFT_1463 at 1476.932 kb on - strand, within EX28DRAFT_1463 at 1476.932 kb on - strand, within EX28DRAFT_1463 at 1477.192 kb on - strand, within EX28DRAFT_1463 at 1477.204 kb on + strand, within EX28DRAFT_1463 at 1477.205 kb on - strand, within EX28DRAFT_1463 at 1477.525 kb on + strand at 1477.526 kb on - strand at 1477.526 kb on - strand at 1477.553 kb on - strand at 1477.639 kb on - strand at 1477.684 kb on + strand, within EX28DRAFT_1464 at 1477.848 kb on + strand, within EX28DRAFT_1464 at 1478.172 kb on - strand, within EX28DRAFT_1464 at 1478.277 kb on + strand at 1478.277 kb on + strand at 1478.278 kb on - strand at 1478.279 kb on + strand at 1478.280 kb on - strand at 1478.321 kb on - strand at 1478.337 kb on + strand at 1478.438 kb on - strand at 1478.466 kb on - strand, within EX28DRAFT_1465 at 1478.474 kb on + strand, within EX28DRAFT_1465 at 1478.474 kb on + strand, within EX28DRAFT_1465 at 1478.503 kb on - strand, within EX28DRAFT_1465 at 1478.546 kb on + strand, within EX28DRAFT_1465 at 1478.546 kb on + strand, within EX28DRAFT_1465 at 1478.546 kb on + strand, within EX28DRAFT_1465 at 1478.547 kb on - strand, within EX28DRAFT_1465 at 1478.628 kb on + strand, within EX28DRAFT_1465 at 1478.653 kb on + strand, within EX28DRAFT_1465 at 1478.665 kb on + strand, within EX28DRAFT_1465 at 1478.672 kb on + strand, within EX28DRAFT_1465 at 1478.673 kb on - strand, within EX28DRAFT_1465 at 1478.708 kb on + strand, within EX28DRAFT_1465 at 1478.708 kb on + strand, within EX28DRAFT_1465 at 1478.842 kb on + strand, within EX28DRAFT_1465 at 1478.842 kb on + strand, within EX28DRAFT_1465 at 1478.843 kb on - strand, within EX28DRAFT_1465 at 1478.899 kb on - strand, within EX28DRAFT_1465 at 1478.899 kb on - strand, within EX28DRAFT_1465 at 1478.899 kb on - strand, within EX28DRAFT_1465 at 1478.916 kb on - strand, within EX28DRAFT_1465 at 1478.916 kb on - strand, within EX28DRAFT_1465 at 1478.916 kb on - strand, within EX28DRAFT_1465 at 1478.916 kb on - strand, within EX28DRAFT_1465 at 1478.933 kb on - strand, within EX28DRAFT_1465 at 1479.086 kb on - strand, within EX28DRAFT_1465 at 1479.086 kb on - strand, within EX28DRAFT_1465 at 1479.128 kb on - strand, within EX28DRAFT_1465
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 1,476,634 + EX28DRAFT_1463 0.63 +0.3 1,476,635 - EX28DRAFT_1463 0.63 -0.2 1,476,760 - EX28DRAFT_1463 0.69 -0.2 1,476,766 - EX28DRAFT_1463 0.69 -0.2 1,476,769 + EX28DRAFT_1463 0.69 -0.1 1,476,905 - EX28DRAFT_1463 0.74 -0.5 1,476,931 + EX28DRAFT_1463 0.76 +0.4 1,476,931 + EX28DRAFT_1463 0.76 +0.2 1,476,932 - EX28DRAFT_1463 0.76 -0.2 1,476,932 - EX28DRAFT_1463 0.76 -0.6 1,476,932 - EX28DRAFT_1463 0.76 +0.1 1,476,932 - EX28DRAFT_1463 0.76 -0.3 1,477,192 - EX28DRAFT_1463 0.86 -0.3 1,477,204 + EX28DRAFT_1463 0.87 +0.4 1,477,205 - EX28DRAFT_1463 0.87 +0.4 1,477,525 + -0.3 1,477,526 - +0.3 1,477,526 - +0.2 1,477,553 - -1.2 1,477,639 - -0.6 1,477,684 + EX28DRAFT_1464 0.10 +0.4 1,477,848 + EX28DRAFT_1464 0.37 -1.3 1,478,172 - EX28DRAFT_1464 0.90 -0.4 1,478,277 + -0.6 1,478,277 + +0.4 1,478,278 - -0.0 1,478,279 + +0.6 1,478,280 - -0.3 1,478,321 - +0.3 1,478,337 + +1.9 1,478,438 - -1.1 1,478,466 - EX28DRAFT_1465 0.11 -0.8 1,478,474 + EX28DRAFT_1465 0.12 -0.7 1,478,474 + EX28DRAFT_1465 0.12 -0.2 1,478,503 - EX28DRAFT_1465 0.13 -1.3 1,478,546 + EX28DRAFT_1465 0.16 +0.2 1,478,546 + EX28DRAFT_1465 0.16 -0.4 1,478,546 + EX28DRAFT_1465 0.16 +1.2 1,478,547 - EX28DRAFT_1465 0.16 -0.2 1,478,628 + EX28DRAFT_1465 0.21 -1.0 1,478,653 + EX28DRAFT_1465 0.22 -0.1 1,478,665 + EX28DRAFT_1465 0.23 +0.5 1,478,672 + EX28DRAFT_1465 0.23 -0.0 1,478,673 - EX28DRAFT_1465 0.23 -0.2 1,478,708 + EX28DRAFT_1465 0.25 -0.1 1,478,708 + EX28DRAFT_1465 0.25 +0.2 1,478,842 + EX28DRAFT_1465 0.33 +0.3 1,478,842 + EX28DRAFT_1465 0.33 +0.2 1,478,843 - EX28DRAFT_1465 0.33 -0.3 1,478,899 - EX28DRAFT_1465 0.36 -0.8 1,478,899 - EX28DRAFT_1465 0.36 -0.2 1,478,899 - EX28DRAFT_1465 0.36 +0.2 1,478,916 - EX28DRAFT_1465 0.37 +3.2 1,478,916 - EX28DRAFT_1465 0.37 -0.4 1,478,916 - EX28DRAFT_1465 0.37 +0.9 1,478,916 - EX28DRAFT_1465 0.37 -0.3 1,478,933 - EX28DRAFT_1465 0.38 -0.6 1,479,086 - EX28DRAFT_1465 0.47 +1.1 1,479,086 - EX28DRAFT_1465 0.47 +0.3 1,479,128 - EX28DRAFT_1465 0.50 -1.1
Or see this region's nucleotide sequence