Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_0467

Experiment: M9 with sucrose; no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_0467 and EX28DRAFT_0468 are separated by 372 nucleotides EX28DRAFT_0467: EX28DRAFT_0467 - hypothetical protein, at 450,649 to 451,281 _0467 EX28DRAFT_0468: EX28DRAFT_0468 - hydroxyethylthiazole kinase, at 451,654 to 452,424 _0468 Position (kb) 450 451 452Strain fitness (log2 ratio) -2 -1 0 1 2at 449.687 kb on - strandat 449.728 kb on + strandat 449.846 kb on + strandat 449.859 kb on + strandat 449.860 kb on - strandat 449.861 kb on + strandat 449.862 kb on - strandat 449.862 kb on - strandat 449.862 kb on - strandat 449.862 kb on - strandat 449.862 kb on - strandat 449.862 kb on - strandat 449.865 kb on + strandat 449.865 kb on + strandat 449.866 kb on - strandat 449.866 kb on - strandat 449.866 kb on - strandat 449.868 kb on + strandat 449.869 kb on - strandat 449.869 kb on - strandat 449.869 kb on - strandat 449.903 kb on - strandat 449.909 kb on - strandat 449.921 kb on + strandat 449.922 kb on - strandat 449.922 kb on - strandat 449.922 kb on - strandat 449.924 kb on + strandat 449.926 kb on + strandat 449.926 kb on + strandat 449.927 kb on - strandat 449.927 kb on - strandat 449.927 kb on - strandat 449.927 kb on - strandat 449.927 kb on - strandat 449.927 kb on - strandat 450.012 kb on + strandat 450.029 kb on + strandat 450.030 kb on - strandat 450.030 kb on - strandat 450.030 kb on - strandat 450.039 kb on - strandat 450.047 kb on + strandat 450.048 kb on - strandat 450.131 kb on + strandat 450.135 kb on + strandat 450.140 kb on - strandat 450.143 kb on + strandat 450.186 kb on + strandat 450.186 kb on + strandat 450.257 kb on + strandat 450.257 kb on + strandat 450.258 kb on - strandat 450.324 kb on + strandat 450.329 kb on + strandat 450.329 kb on + strandat 450.352 kb on + strandat 450.353 kb on - strandat 450.354 kb on + strandat 450.385 kb on + strandat 450.385 kb on + strandat 450.385 kb on + strandat 450.386 kb on - strandat 450.430 kb on + strandat 450.486 kb on - strandat 450.526 kb on - strandat 450.526 kb on - strandat 450.542 kb on + strandat 450.543 kb on - strandat 450.543 kb on - strandat 450.559 kb on - strandat 450.584 kb on + strandat 450.584 kb on + strandat 450.584 kb on + strandat 450.584 kb on + strandat 450.585 kb on - strandat 450.618 kb on + strandat 450.618 kb on + strandat 450.618 kb on + strandat 450.618 kb on + strandat 450.618 kb on + strandat 450.619 kb on - strandat 450.622 kb on + strandat 450.622 kb on + strandat 450.622 kb on + strandat 450.622 kb on + strandat 450.622 kb on + strandat 450.622 kb on + strandat 450.622 kb on + strandat 450.622 kb on + strandat 450.622 kb on + strandat 450.622 kb on + strandat 450.622 kb on + strandat 450.623 kb on - strandat 450.623 kb on - strandat 450.623 kb on - strandat 450.623 kb on - strandat 450.623 kb on - strandat 450.628 kb on + strandat 450.628 kb on + strandat 450.660 kb on + strandat 450.660 kb on + strandat 450.660 kb on + strandat 450.687 kb on + strandat 450.688 kb on - strandat 450.756 kb on + strand, within EX28DRAFT_0467at 450.757 kb on - strand, within EX28DRAFT_0467at 450.842 kb on - strand, within EX28DRAFT_0467at 450.846 kb on - strand, within EX28DRAFT_0467at 450.880 kb on + strand, within EX28DRAFT_0467at 450.880 kb on + strand, within EX28DRAFT_0467at 450.881 kb on - strand, within EX28DRAFT_0467at 450.885 kb on + strand, within EX28DRAFT_0467at 450.936 kb on + strand, within EX28DRAFT_0467at 450.936 kb on + strand, within EX28DRAFT_0467at 450.994 kb on - strand, within EX28DRAFT_0467at 451.074 kb on - strand, within EX28DRAFT_0467at 451.101 kb on + strand, within EX28DRAFT_0467at 451.102 kb on - strand, within EX28DRAFT_0467at 451.117 kb on - strand, within EX28DRAFT_0467at 451.141 kb on + strand, within EX28DRAFT_0467at 451.256 kb on - strandat 451.259 kb on + strandat 451.260 kb on - strandat 451.296 kb on + strandat 451.297 kb on - strandat 451.318 kb on + strandat 451.319 kb on - strandat 451.369 kb on - strandat 451.385 kb on + strandat 451.385 kb on + strandat 451.385 kb on + strandat 451.385 kb on + strandat 451.390 kb on + strandat 451.390 kb on + strandat 451.390 kb on + strandat 451.390 kb on + strandat 451.391 kb on - strandat 451.470 kb on - strandat 451.569 kb on + strandat 451.572 kb on + strandat 451.572 kb on + strandat 451.677 kb on - strandat 451.740 kb on - strand, within EX28DRAFT_0468at 451.857 kb on + strand, within EX28DRAFT_0468at 451.899 kb on - strand, within EX28DRAFT_0468

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control
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449,687 - +0.1
449,728 + +0.6
449,846 + +1.1
449,859 + +0.5
449,860 - -0.1
449,861 + -0.5
449,862 - +0.4
449,862 - +0.0
449,862 - +0.0
449,862 - +0.3
449,862 - -2.2
449,862 - +0.2
449,865 + +0.2
449,865 + -0.1
449,866 - -0.2
449,866 - -0.4
449,866 - -0.8
449,868 + -1.2
449,869 - -0.3
449,869 - +1.2
449,869 - +0.3
449,903 - +0.4
449,909 - -0.5
449,921 + -0.3
449,922 - +0.2
449,922 - -0.8
449,922 - -0.4
449,924 + +0.4
449,926 + -0.3
449,926 + -0.7
449,927 - -1.9
449,927 - -0.5
449,927 - +0.7
449,927 - +0.4
449,927 - -2.0
449,927 - +2.1
450,012 + +0.6
450,029 + -1.4
450,030 - -0.7
450,030 - +0.5
450,030 - -1.2
450,039 - +1.1
450,047 + -0.1
450,048 - +0.2
450,131 + +0.2
450,135 + -0.3
450,140 - -1.2
450,143 + -0.7
450,186 + +0.0
450,186 + +0.8
450,257 + -0.0
450,257 + +0.7
450,258 - +0.4
450,324 + -0.9
450,329 + +0.4
450,329 + +0.5
450,352 + +0.0
450,353 - +0.1
450,354 + +0.1
450,385 + +0.2
450,385 + +0.5
450,385 + +0.5
450,386 - -0.1
450,430 + +0.2
450,486 - +1.1
450,526 - +0.5
450,526 - +0.8
450,542 + +1.1
450,543 - -0.4
450,543 - -0.2
450,559 - -0.2
450,584 + -0.7
450,584 + -0.2
450,584 + -0.3
450,584 + +0.3
450,585 - -0.0
450,618 + +0.4
450,618 + +0.2
450,618 + -0.4
450,618 + +0.0
450,618 + -0.5
450,619 - -0.0
450,622 + +0.2
450,622 + +0.2
450,622 + -1.1
450,622 + +0.4
450,622 + -0.5
450,622 + -0.1
450,622 + +0.3
450,622 + -1.8
450,622 + +0.0
450,622 + +0.2
450,622 + +0.3
450,623 - +0.1
450,623 - -0.8
450,623 - -1.0
450,623 - +0.0
450,623 - +0.9
450,628 + +0.4
450,628 + +0.5
450,660 + +0.7
450,660 + -0.1
450,660 + -0.3
450,687 + +0.2
450,688 - -1.2
450,756 + EX28DRAFT_0467 0.17 -0.3
450,757 - EX28DRAFT_0467 0.17 +0.9
450,842 - EX28DRAFT_0467 0.30 +0.0
450,846 - EX28DRAFT_0467 0.31 +0.1
450,880 + EX28DRAFT_0467 0.36 +0.1
450,880 + EX28DRAFT_0467 0.36 +0.2
450,881 - EX28DRAFT_0467 0.37 +0.3
450,885 + EX28DRAFT_0467 0.37 -1.6
450,936 + EX28DRAFT_0467 0.45 +0.3
450,936 + EX28DRAFT_0467 0.45 -0.1
450,994 - EX28DRAFT_0467 0.55 +0.1
451,074 - EX28DRAFT_0467 0.67 +0.1
451,101 + EX28DRAFT_0467 0.71 -0.5
451,102 - EX28DRAFT_0467 0.72 -0.4
451,117 - EX28DRAFT_0467 0.74 +0.1
451,141 + EX28DRAFT_0467 0.78 -0.5
451,256 - +0.2
451,259 + -0.9
451,260 - -0.8
451,296 + -0.1
451,297 - -0.8
451,318 + +1.7
451,319 - -0.3
451,369 - +0.1
451,385 + +0.6
451,385 + -0.1
451,385 + -0.4
451,385 + -0.2
451,390 + -0.2
451,390 + +0.1
451,390 + -0.4
451,390 + -0.3
451,391 - -0.5
451,470 - -0.4
451,569 + -0.3
451,572 + -0.1
451,572 + +0.4
451,677 - -0.6
451,740 - EX28DRAFT_0468 0.11 -0.3
451,857 + EX28DRAFT_0468 0.26 -2.0
451,899 - EX28DRAFT_0468 0.32 -0.6

Or see this region's nucleotide sequence