Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS02945 and ABIE41_RS02950 overlap by 8 nucleotides ABIE41_RS02950 and ABIE41_RS02955 are separated by 92 nucleotides ABIE41_RS02955 and ABIE41_RS02960 are separated by 1 nucleotides ABIE41_RS02960 and ABIE41_RS02965 are separated by 12 nucleotides
ABIE41_RS02945: ABIE41_RS02945 - lysylphosphatidylglycerol synthase domain-containing protein, at 609,741 to 610,667
_RS02945
ABIE41_RS02950: ABIE41_RS02950 - methyltransferase domain-containing protein, at 610,660 to 611,289
_RS02950
ABIE41_RS02955: ABIE41_RS02955 - hypothetical protein, at 611,382 to 612,290
_RS02955
ABIE41_RS02960: ABIE41_RS02960 - acetyltransferase, at 612,292 to 612,960
_RS02960
ABIE41_RS02965: ABIE41_RS02965 - class I SAM-dependent methyltransferase, at 612,973 to 613,617
_RS02965
Position (kb) 611
612
613 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 610.398 kb on - strand, within ABIE41_RS02945 at 610.398 kb on - strand, within ABIE41_RS02945 at 610.576 kb on + strand at 610.591 kb on + strand at 610.592 kb on - strand at 610.592 kb on - strand at 610.592 kb on - strand at 610.600 kb on + strand at 610.600 kb on + strand at 610.600 kb on + strand at 610.601 kb on - strand at 610.601 kb on - strand at 610.601 kb on - strand at 610.606 kb on + strand at 610.621 kb on + strand at 610.622 kb on - strand at 610.691 kb on + strand at 610.691 kb on + strand at 610.692 kb on - strand at 610.791 kb on + strand, within ABIE41_RS02950 at 610.792 kb on - strand, within ABIE41_RS02950 at 610.792 kb on - strand, within ABIE41_RS02950 at 610.792 kb on - strand, within ABIE41_RS02950 at 610.792 kb on - strand, within ABIE41_RS02950 at 610.855 kb on + strand, within ABIE41_RS02950 at 610.855 kb on + strand, within ABIE41_RS02950 at 610.855 kb on + strand, within ABIE41_RS02950 at 610.855 kb on + strand, within ABIE41_RS02950 at 610.856 kb on - strand, within ABIE41_RS02950 at 610.856 kb on - strand, within ABIE41_RS02950 at 610.856 kb on - strand, within ABIE41_RS02950 at 610.856 kb on - strand, within ABIE41_RS02950 at 610.856 kb on - strand, within ABIE41_RS02950 at 610.856 kb on - strand, within ABIE41_RS02950 at 610.856 kb on - strand, within ABIE41_RS02950 at 610.856 kb on - strand, within ABIE41_RS02950 at 610.858 kb on - strand, within ABIE41_RS02950 at 610.881 kb on + strand, within ABIE41_RS02950 at 610.882 kb on + strand, within ABIE41_RS02950 at 610.882 kb on + strand, within ABIE41_RS02950 at 610.882 kb on + strand, within ABIE41_RS02950 at 610.882 kb on + strand, within ABIE41_RS02950 at 610.882 kb on + strand, within ABIE41_RS02950 at 610.883 kb on - strand, within ABIE41_RS02950 at 610.883 kb on - strand, within ABIE41_RS02950 at 610.939 kb on + strand, within ABIE41_RS02950 at 610.940 kb on - strand, within ABIE41_RS02950 at 611.098 kb on + strand, within ABIE41_RS02950 at 611.098 kb on + strand, within ABIE41_RS02950 at 611.098 kb on + strand, within ABIE41_RS02950 at 611.098 kb on + strand, within ABIE41_RS02950 at 611.098 kb on + strand, within ABIE41_RS02950 at 611.098 kb on + strand, within ABIE41_RS02950 at 611.098 kb on + strand, within ABIE41_RS02950 at 611.098 kb on + strand, within ABIE41_RS02950 at 611.099 kb on - strand, within ABIE41_RS02950 at 611.099 kb on - strand, within ABIE41_RS02950 at 611.099 kb on - strand, within ABIE41_RS02950 at 611.099 kb on - strand, within ABIE41_RS02950 at 611.099 kb on - strand, within ABIE41_RS02950 at 611.140 kb on - strand, within ABIE41_RS02950 at 611.140 kb on - strand, within ABIE41_RS02950 at 611.176 kb on + strand, within ABIE41_RS02950 at 611.176 kb on + strand, within ABIE41_RS02950 at 611.176 kb on + strand, within ABIE41_RS02950 at 611.177 kb on - strand, within ABIE41_RS02950 at 611.177 kb on - strand, within ABIE41_RS02950 at 611.245 kb on + strand at 611.245 kb on + strand at 611.245 kb on + strand at 611.245 kb on + strand at 611.245 kb on + strand at 611.245 kb on + strand at 611.246 kb on - strand at 611.246 kb on - strand at 611.247 kb on + strand at 611.247 kb on + strand at 611.247 kb on + strand at 611.247 kb on + strand at 611.247 kb on + strand at 611.248 kb on - strand at 611.248 kb on - strand at 611.248 kb on - strand at 611.251 kb on + strand at 611.251 kb on + strand at 611.252 kb on - strand at 611.300 kb on + strand at 611.437 kb on + strand at 611.437 kb on + strand at 611.438 kb on - strand at 611.438 kb on - strand at 611.438 kb on - strand at 611.438 kb on - strand at 611.479 kb on + strand, within ABIE41_RS02955 at 611.479 kb on + strand, within ABIE41_RS02955 at 611.479 kb on + strand, within ABIE41_RS02955 at 611.587 kb on + strand, within ABIE41_RS02955 at 611.588 kb on - strand, within ABIE41_RS02955 at 611.588 kb on - strand, within ABIE41_RS02955 at 611.588 kb on - strand, within ABIE41_RS02955 at 611.662 kb on + strand, within ABIE41_RS02955 at 611.662 kb on + strand, within ABIE41_RS02955 at 611.687 kb on + strand, within ABIE41_RS02955 at 611.839 kb on + strand, within ABIE41_RS02955 at 611.840 kb on - strand, within ABIE41_RS02955 at 611.986 kb on + strand, within ABIE41_RS02955 at 611.986 kb on + strand, within ABIE41_RS02955 at 611.986 kb on + strand, within ABIE41_RS02955 at 611.986 kb on + strand, within ABIE41_RS02955 at 611.986 kb on + strand, within ABIE41_RS02955 at 611.986 kb on + strand, within ABIE41_RS02955 at 611.987 kb on - strand, within ABIE41_RS02955 at 611.987 kb on - strand, within ABIE41_RS02955 at 611.990 kb on - strand, within ABIE41_RS02955 at 611.990 kb on - strand, within ABIE41_RS02955 at 611.991 kb on + strand, within ABIE41_RS02955 at 611.992 kb on - strand, within ABIE41_RS02955 at 612.217 kb on + strand at 612.231 kb on + strand at 612.231 kb on + strand at 612.231 kb on + strand at 612.232 kb on - strand at 612.543 kb on + strand, within ABIE41_RS02960 at 612.601 kb on - strand, within ABIE41_RS02960 at 612.669 kb on + strand, within ABIE41_RS02960 at 612.669 kb on + strand, within ABIE41_RS02960 at 612.670 kb on - strand, within ABIE41_RS02960 at 612.670 kb on - strand, within ABIE41_RS02960 at 612.671 kb on + strand, within ABIE41_RS02960 at 612.671 kb on + strand, within ABIE41_RS02960 at 612.672 kb on - strand, within ABIE41_RS02960 at 612.743 kb on + strand, within ABIE41_RS02960 at 612.845 kb on + strand, within ABIE41_RS02960 at 612.845 kb on + strand, within ABIE41_RS02960 at 612.845 kb on + strand, within ABIE41_RS02960 at 612.845 kb on + strand, within ABIE41_RS02960 at 612.845 kb on + strand, within ABIE41_RS02960 at 612.846 kb on - strand, within ABIE41_RS02960 at 612.846 kb on - strand, within ABIE41_RS02960 at 612.846 kb on - strand, within ABIE41_RS02960 at 612.846 kb on - strand, within ABIE41_RS02960 at 612.846 kb on - strand, within ABIE41_RS02960 at 612.846 kb on - strand, within ABIE41_RS02960 at 612.900 kb on - strand at 612.900 kb on - strand at 612.974 kb on + strand at 613.007 kb on + strand at 613.007 kb on + strand at 613.008 kb on - strand at 613.010 kb on + strand at 613.010 kb on + strand at 613.032 kb on - strand at 613.205 kb on + strand, within ABIE41_RS02965 at 613.205 kb on + strand, within ABIE41_RS02965 at 613.269 kb on - strand, within ABIE41_RS02965
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 610,398 - ABIE41_RS02945 0.71 -0.4 610,398 - ABIE41_RS02945 0.71 +0.8 610,576 + +0.3 610,591 + +1.5 610,592 - -0.4 610,592 - +0.2 610,592 - -0.6 610,600 + +0.5 610,600 + +0.8 610,600 + -0.8 610,601 - +0.2 610,601 - -0.4 610,601 - +0.2 610,606 + +0.6 610,621 + +0.4 610,622 - +0.9 610,691 + -0.2 610,691 + +0.9 610,692 - +0.3 610,791 + ABIE41_RS02950 0.21 +0.1 610,792 - ABIE41_RS02950 0.21 -0.2 610,792 - ABIE41_RS02950 0.21 -0.1 610,792 - ABIE41_RS02950 0.21 +0.8 610,792 - ABIE41_RS02950 0.21 +1.2 610,855 + ABIE41_RS02950 0.31 +0.4 610,855 + ABIE41_RS02950 0.31 +0.2 610,855 + ABIE41_RS02950 0.31 +0.2 610,855 + ABIE41_RS02950 0.31 +1.0 610,856 - ABIE41_RS02950 0.31 +0.1 610,856 - ABIE41_RS02950 0.31 -0.6 610,856 - ABIE41_RS02950 0.31 -0.3 610,856 - ABIE41_RS02950 0.31 -0.6 610,856 - ABIE41_RS02950 0.31 +0.3 610,856 - ABIE41_RS02950 0.31 +1.0 610,856 - ABIE41_RS02950 0.31 +0.9 610,856 - ABIE41_RS02950 0.31 +0.0 610,858 - ABIE41_RS02950 0.31 +1.4 610,881 + ABIE41_RS02950 0.35 +0.8 610,882 + ABIE41_RS02950 0.35 -0.9 610,882 + ABIE41_RS02950 0.35 +0.5 610,882 + ABIE41_RS02950 0.35 +0.7 610,882 + ABIE41_RS02950 0.35 +0.9 610,882 + ABIE41_RS02950 0.35 -0.6 610,883 - ABIE41_RS02950 0.35 -0.5 610,883 - ABIE41_RS02950 0.35 +0.3 610,939 + ABIE41_RS02950 0.44 -2.2 610,940 - ABIE41_RS02950 0.44 +0.1 611,098 + ABIE41_RS02950 0.70 -0.5 611,098 + ABIE41_RS02950 0.70 -0.2 611,098 + ABIE41_RS02950 0.70 +0.2 611,098 + ABIE41_RS02950 0.70 +0.3 611,098 + ABIE41_RS02950 0.70 +0.8 611,098 + ABIE41_RS02950 0.70 +0.5 611,098 + ABIE41_RS02950 0.70 +2.3 611,098 + ABIE41_RS02950 0.70 +0.3 611,099 - ABIE41_RS02950 0.70 -0.4 611,099 - ABIE41_RS02950 0.70 +1.6 611,099 - ABIE41_RS02950 0.70 -0.3 611,099 - ABIE41_RS02950 0.70 +0.6 611,099 - ABIE41_RS02950 0.70 +1.0 611,140 - ABIE41_RS02950 0.76 -0.2 611,140 - ABIE41_RS02950 0.76 -0.3 611,176 + ABIE41_RS02950 0.82 +0.7 611,176 + ABIE41_RS02950 0.82 -0.6 611,176 + ABIE41_RS02950 0.82 +1.5 611,177 - ABIE41_RS02950 0.82 +0.5 611,177 - ABIE41_RS02950 0.82 +1.1 611,245 + +0.1 611,245 + -0.1 611,245 + -0.0 611,245 + +0.9 611,245 + -0.7 611,245 + -0.8 611,246 - +0.1 611,246 - -0.2 611,247 + +0.8 611,247 + +0.9 611,247 + -1.0 611,247 + -0.1 611,247 + +1.1 611,248 - +0.6 611,248 - -1.4 611,248 - +0.0 611,251 + +1.9 611,251 + +1.2 611,252 - +1.0 611,300 + -0.1 611,437 + -2.4 611,437 + -1.7 611,438 - -1.3 611,438 - -2.4 611,438 - -3.8 611,438 - +1.9 611,479 + ABIE41_RS02955 0.11 -0.4 611,479 + ABIE41_RS02955 0.11 -1.6 611,479 + ABIE41_RS02955 0.11 -2.6 611,587 + ABIE41_RS02955 0.23 -2.2 611,588 - ABIE41_RS02955 0.23 -1.1 611,588 - ABIE41_RS02955 0.23 -1.8 611,588 - ABIE41_RS02955 0.23 -2.5 611,662 + ABIE41_RS02955 0.31 +0.9 611,662 + ABIE41_RS02955 0.31 -2.5 611,687 + ABIE41_RS02955 0.34 -1.6 611,839 + ABIE41_RS02955 0.50 -3.1 611,840 - ABIE41_RS02955 0.50 -0.1 611,986 + ABIE41_RS02955 0.66 -2.2 611,986 + ABIE41_RS02955 0.66 -2.6 611,986 + ABIE41_RS02955 0.66 -2.5 611,986 + ABIE41_RS02955 0.66 -3.9 611,986 + ABIE41_RS02955 0.66 -0.6 611,986 + ABIE41_RS02955 0.66 -3.0 611,987 - ABIE41_RS02955 0.67 -1.4 611,987 - ABIE41_RS02955 0.67 -1.1 611,990 - ABIE41_RS02955 0.67 -3.0 611,990 - ABIE41_RS02955 0.67 -3.1 611,991 + ABIE41_RS02955 0.67 -0.4 611,992 - ABIE41_RS02955 0.67 -3.9 612,217 + -2.5 612,231 + -4.3 612,231 + -2.8 612,231 + -3.2 612,232 - -1.5 612,543 + ABIE41_RS02960 0.38 -4.7 612,601 - ABIE41_RS02960 0.46 -0.5 612,669 + ABIE41_RS02960 0.56 -3.0 612,669 + ABIE41_RS02960 0.56 -2.0 612,670 - ABIE41_RS02960 0.57 -4.2 612,670 - ABIE41_RS02960 0.57 +0.9 612,671 + ABIE41_RS02960 0.57 +0.2 612,671 + ABIE41_RS02960 0.57 -0.9 612,672 - ABIE41_RS02960 0.57 -0.1 612,743 + ABIE41_RS02960 0.67 -3.9 612,845 + ABIE41_RS02960 0.83 -4.4 612,845 + ABIE41_RS02960 0.83 -4.9 612,845 + ABIE41_RS02960 0.83 -3.0 612,845 + ABIE41_RS02960 0.83 -1.8 612,845 + ABIE41_RS02960 0.83 -3.3 612,846 - ABIE41_RS02960 0.83 -5.1 612,846 - ABIE41_RS02960 0.83 -3.4 612,846 - ABIE41_RS02960 0.83 -1.1 612,846 - ABIE41_RS02960 0.83 -3.6 612,846 - ABIE41_RS02960 0.83 -3.2 612,846 - ABIE41_RS02960 0.83 -4.8 612,900 - -1.4 612,900 - -3.2 612,974 + -1.4 613,007 + -3.9 613,007 + -4.1 613,008 - +0.4 613,010 + -3.3 613,010 + -3.0 613,032 - -1.3 613,205 + ABIE41_RS02965 0.36 -3.5 613,205 + ABIE41_RS02965 0.36 -2.1 613,269 - ABIE41_RS02965 0.46 -1.9
Or see this region's nucleotide sequence