Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS27140 and ABID97_RS27145 are separated by 350 nucleotides ABID97_RS27145 and ABID97_RS27150 are separated by 39 nucleotides ABID97_RS27150 and ABID97_RS27155 are separated by 19 nucleotides
ABID97_RS27140: ABID97_RS27140 - winged helix-turn-helix domain-containing protein, at 345,612 to 346,367
_RS27140
ABID97_RS27145: ABID97_RS27145 - autotransporter outer membrane beta-barrel domain-containing protein, at 346,718 to 352,069
_RS27145
ABID97_RS27150: ABID97_RS27150 - OmpA family protein, at 352,109 to 352,690
_RS27150
ABID97_RS27155: ABID97_RS27155 - TauD/TfdA family dioxygenase, at 352,710 to 353,669
_RS27155
Position (kb) 346
347
348
349
350
351
352
353 Strain fitness (log2 ratio) -1
0
1 at 346.051 kb on - strand, within ABID97_RS27140 at 346.302 kb on + strand at 346.302 kb on + strand at 346.302 kb on + strand at 346.366 kb on - strand at 346.407 kb on + strand at 346.575 kb on - strand at 346.604 kb on + strand at 346.604 kb on + strand at 346.605 kb on - strand at 346.670 kb on + strand at 346.730 kb on + strand at 346.742 kb on + strand at 346.743 kb on - strand at 347.173 kb on + strand at 347.228 kb on + strand at 347.230 kb on + strand at 347.230 kb on + strand at 347.230 kb on + strand at 347.231 kb on - strand at 347.231 kb on - strand at 347.231 kb on - strand at 347.297 kb on - strand, within ABID97_RS27145 at 347.650 kb on + strand, within ABID97_RS27145 at 347.650 kb on + strand, within ABID97_RS27145 at 347.672 kb on - strand, within ABID97_RS27145 at 347.672 kb on - strand, within ABID97_RS27145 at 347.676 kb on + strand, within ABID97_RS27145 at 347.694 kb on - strand, within ABID97_RS27145 at 347.694 kb on - strand, within ABID97_RS27145 at 347.694 kb on - strand, within ABID97_RS27145 at 347.694 kb on - strand, within ABID97_RS27145 at 347.740 kb on - strand, within ABID97_RS27145 at 348.056 kb on + strand, within ABID97_RS27145 at 348.307 kb on + strand, within ABID97_RS27145 at 348.444 kb on - strand, within ABID97_RS27145 at 348.818 kb on + strand, within ABID97_RS27145 at 348.818 kb on + strand, within ABID97_RS27145 at 348.819 kb on - strand, within ABID97_RS27145 at 348.999 kb on - strand, within ABID97_RS27145 at 348.999 kb on - strand, within ABID97_RS27145 at 348.999 kb on - strand, within ABID97_RS27145 at 349.737 kb on - strand, within ABID97_RS27145 at 349.841 kb on + strand, within ABID97_RS27145 at 350.114 kb on + strand, within ABID97_RS27145 at 350.897 kb on + strand, within ABID97_RS27145 at 351.978 kb on - strand at 351.978 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 346,051 - ABID97_RS27140 0.58 -0.9 346,302 + +0.4 346,302 + -0.8 346,302 + -0.1 346,366 - +0.0 346,407 + +1.5 346,575 - +0.1 346,604 + +1.4 346,604 + +0.9 346,605 - +0.5 346,670 + +0.0 346,730 + +0.3 346,742 + +0.3 346,743 - -0.1 347,173 + +0.3 347,228 + -0.1 347,230 + +0.0 347,230 + -0.5 347,230 + -0.4 347,231 - +0.0 347,231 - +0.2 347,231 - -0.0 347,297 - ABID97_RS27145 0.11 +1.0 347,650 + ABID97_RS27145 0.17 -0.1 347,650 + ABID97_RS27145 0.17 -0.9 347,672 - ABID97_RS27145 0.18 +0.1 347,672 - ABID97_RS27145 0.18 -1.6 347,676 + ABID97_RS27145 0.18 -0.2 347,694 - ABID97_RS27145 0.18 -0.2 347,694 - ABID97_RS27145 0.18 +0.3 347,694 - ABID97_RS27145 0.18 +0.9 347,694 - ABID97_RS27145 0.18 +0.0 347,740 - ABID97_RS27145 0.19 +1.4 348,056 + ABID97_RS27145 0.25 +0.1 348,307 + ABID97_RS27145 0.30 -0.2 348,444 - ABID97_RS27145 0.32 -0.1 348,818 + ABID97_RS27145 0.39 +0.1 348,818 + ABID97_RS27145 0.39 -0.1 348,819 - ABID97_RS27145 0.39 +0.4 348,999 - ABID97_RS27145 0.43 +0.1 348,999 - ABID97_RS27145 0.43 +1.3 348,999 - ABID97_RS27145 0.43 -0.1 349,737 - ABID97_RS27145 0.56 +0.1 349,841 + ABID97_RS27145 0.58 +1.5 350,114 + ABID97_RS27145 0.63 -0.2 350,897 + ABID97_RS27145 0.78 +0.2 351,978 - +0.3 351,978 - -0.7
Or see this region's nucleotide sequence