Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22690 and ABID97_RS22695 are separated by 49 nucleotides ABID97_RS22695 and ABID97_RS22700 are separated by 12 nucleotides ABID97_RS22700 and ABID97_RS22705 are separated by 119 nucleotides
ABID97_RS22690: ABID97_RS22690 - LysR family transcriptional regulator, at 4,700,562 to 4,701,488
_RS22690
ABID97_RS22695: ABID97_RS22695 - tripartite tricarboxylate transporter permease, at 4,701,538 to 4,703,052
_RS22695
ABID97_RS22700: ABID97_RS22700 - tripartite tricarboxylate transporter TctB family protein, at 4,703,065 to 4,703,553
_RS22700
ABID97_RS22705: ABID97_RS22705 - ATPase, T2SS/T4P/T4SS family, at 4,703,673 to 4,705,469
_RS22705
Position (kb) 4701
4702
4703
4704 Strain fitness (log2 ratio) -1
0
1 at 4700.549 kb on - strand at 4701.228 kb on + strand, within ABID97_RS22690 at 4701.229 kb on - strand, within ABID97_RS22690 at 4701.316 kb on - strand, within ABID97_RS22690 at 4701.773 kb on + strand, within ABID97_RS22695 at 4701.834 kb on - strand, within ABID97_RS22695 at 4701.882 kb on - strand, within ABID97_RS22695 at 4701.882 kb on - strand, within ABID97_RS22695 at 4702.214 kb on + strand, within ABID97_RS22695 at 4702.214 kb on + strand, within ABID97_RS22695 at 4702.215 kb on - strand, within ABID97_RS22695 at 4702.475 kb on + strand, within ABID97_RS22695 at 4702.476 kb on - strand, within ABID97_RS22695 at 4702.848 kb on - strand, within ABID97_RS22695 at 4702.896 kb on - strand, within ABID97_RS22695 at 4702.896 kb on - strand, within ABID97_RS22695 at 4702.988 kb on + strand at 4703.007 kb on + strand at 4703.007 kb on + strand at 4703.129 kb on + strand, within ABID97_RS22700 at 4703.129 kb on + strand, within ABID97_RS22700 at 4703.129 kb on + strand, within ABID97_RS22700 at 4703.130 kb on - strand, within ABID97_RS22700 at 4703.130 kb on - strand, within ABID97_RS22700 at 4703.130 kb on - strand, within ABID97_RS22700 at 4703.130 kb on - strand, within ABID97_RS22700 at 4703.130 kb on - strand, within ABID97_RS22700 at 4703.219 kb on + strand, within ABID97_RS22700 at 4703.461 kb on + strand, within ABID97_RS22700 at 4703.461 kb on + strand, within ABID97_RS22700 at 4703.468 kb on + strand, within ABID97_RS22700 at 4703.469 kb on - strand, within ABID97_RS22700 at 4703.496 kb on + strand, within ABID97_RS22700 at 4703.496 kb on + strand, within ABID97_RS22700 at 4703.500 kb on + strand, within ABID97_RS22700 at 4703.500 kb on + strand, within ABID97_RS22700 at 4703.501 kb on - strand, within ABID97_RS22700 at 4703.501 kb on - strand, within ABID97_RS22700 at 4703.501 kb on - strand, within ABID97_RS22700 at 4703.509 kb on - strand at 4703.879 kb on - strand, within ABID97_RS22705 at 4703.879 kb on - strand, within ABID97_RS22705
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 4,700,549 - +0.2 4,701,228 + ABID97_RS22690 0.72 +0.4 4,701,229 - ABID97_RS22690 0.72 -0.3 4,701,316 - ABID97_RS22690 0.81 +0.6 4,701,773 + ABID97_RS22695 0.16 +0.2 4,701,834 - ABID97_RS22695 0.20 -0.5 4,701,882 - ABID97_RS22695 0.23 -0.9 4,701,882 - ABID97_RS22695 0.23 -0.3 4,702,214 + ABID97_RS22695 0.45 -0.2 4,702,214 + ABID97_RS22695 0.45 -1.3 4,702,215 - ABID97_RS22695 0.45 +1.2 4,702,475 + ABID97_RS22695 0.62 -0.1 4,702,476 - ABID97_RS22695 0.62 -0.6 4,702,848 - ABID97_RS22695 0.86 -0.4 4,702,896 - ABID97_RS22695 0.90 -0.2 4,702,896 - ABID97_RS22695 0.90 -0.6 4,702,988 + -1.1 4,703,007 + -0.5 4,703,007 + -0.4 4,703,129 + ABID97_RS22700 0.13 -0.7 4,703,129 + ABID97_RS22700 0.13 -0.6 4,703,129 + ABID97_RS22700 0.13 -0.5 4,703,130 - ABID97_RS22700 0.13 +0.1 4,703,130 - ABID97_RS22700 0.13 -0.3 4,703,130 - ABID97_RS22700 0.13 -0.3 4,703,130 - ABID97_RS22700 0.13 -0.6 4,703,130 - ABID97_RS22700 0.13 -0.4 4,703,219 + ABID97_RS22700 0.31 -0.2 4,703,461 + ABID97_RS22700 0.81 -0.6 4,703,461 + ABID97_RS22700 0.81 -0.2 4,703,468 + ABID97_RS22700 0.82 -0.3 4,703,469 - ABID97_RS22700 0.83 +1.1 4,703,496 + ABID97_RS22700 0.88 +0.1 4,703,496 + ABID97_RS22700 0.88 -0.2 4,703,500 + ABID97_RS22700 0.89 -0.4 4,703,500 + ABID97_RS22700 0.89 -1.1 4,703,501 - ABID97_RS22700 0.89 +0.4 4,703,501 - ABID97_RS22700 0.89 -0.1 4,703,501 - ABID97_RS22700 0.89 -1.2 4,703,509 - -1.0 4,703,879 - ABID97_RS22705 0.11 -1.3 4,703,879 - ABID97_RS22705 0.11 -0.4
Or see this region's nucleotide sequence