Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS20640 and ABID97_RS20645 overlap by 4 nucleotides ABID97_RS20645 and ABID97_RS20650 are separated by 5 nucleotides ABID97_RS20650 and ABID97_RS20655 are separated by 110 nucleotides ABID97_RS20655 and ABID97_RS20660 are separated by 123 nucleotides ABID97_RS20660 and ABID97_RS20665 overlap by 1 nucleotides
ABID97_RS20640: ABID97_RS20640 - sterol desaturase family protein, at 4,264,487 to 4,265,617
_RS20640
ABID97_RS20645: ABID97_RS20645 - YaeF family permuted papain-like enzyme, at 4,265,614 to 4,266,399
_RS20645
ABID97_RS20650: ABID97_RS20650 - NAD(P)/FAD-dependent oxidoreductase, at 4,266,405 to 4,267,637
_RS20650
ABID97_RS20655: ABID97_RS20655 - 30S ribosomal protein S21, at 4,267,748 to 4,267,960
_RS20655
ABID97_RS20660: ABID97_RS20660 - GatB/YqeY domain-containing protein, at 4,268,084 to 4,268,533
_RS20660
ABID97_RS20665: ABID97_RS20665 - NUDIX domain-containing protein, at 4,268,533 to 4,269,003
_RS20665
Position (kb) 4266
4267
4268 Strain fitness (log2 ratio) -1
0
1 at 4265.468 kb on + strand, within ABID97_RS20640 at 4265.469 kb on - strand, within ABID97_RS20640 at 4265.469 kb on - strand, within ABID97_RS20640 at 4265.481 kb on - strand, within ABID97_RS20640 at 4265.496 kb on - strand, within ABID97_RS20640 at 4265.543 kb on + strand at 4265.544 kb on - strand at 4265.562 kb on - strand at 4265.881 kb on + strand, within ABID97_RS20645 at 4266.053 kb on - strand, within ABID97_RS20645 at 4266.344 kb on - strand at 4266.361 kb on + strand at 4266.361 kb on + strand at 4266.361 kb on + strand at 4266.361 kb on + strand at 4266.361 kb on + strand at 4266.362 kb on - strand at 4266.414 kb on - strand at 4266.871 kb on - strand, within ABID97_RS20650 at 4267.059 kb on + strand, within ABID97_RS20650 at 4267.194 kb on + strand, within ABID97_RS20650 at 4267.195 kb on - strand, within ABID97_RS20650 at 4267.195 kb on - strand, within ABID97_RS20650 at 4267.195 kb on - strand, within ABID97_RS20650 at 4267.456 kb on - strand, within ABID97_RS20650 at 4267.540 kb on - strand at 4267.540 kb on - strand at 4267.584 kb on + strand at 4267.584 kb on + strand at 4267.955 kb on + strand at 4267.955 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 4,265,468 + ABID97_RS20640 0.87 -0.6 4,265,469 - ABID97_RS20640 0.87 -0.3 4,265,469 - ABID97_RS20640 0.87 +1.3 4,265,481 - ABID97_RS20640 0.88 -0.0 4,265,496 - ABID97_RS20640 0.89 -0.4 4,265,543 + -0.3 4,265,544 - +0.0 4,265,562 - -0.2 4,265,881 + ABID97_RS20645 0.34 -0.1 4,266,053 - ABID97_RS20645 0.56 -0.3 4,266,344 - -0.5 4,266,361 + +0.0 4,266,361 + +0.3 4,266,361 + +0.1 4,266,361 + +0.0 4,266,361 + -0.5 4,266,362 - -0.2 4,266,414 - -1.7 4,266,871 - ABID97_RS20650 0.38 -0.4 4,267,059 + ABID97_RS20650 0.53 -0.2 4,267,194 + ABID97_RS20650 0.64 -0.7 4,267,195 - ABID97_RS20650 0.64 -0.2 4,267,195 - ABID97_RS20650 0.64 -0.1 4,267,195 - ABID97_RS20650 0.64 -0.1 4,267,456 - ABID97_RS20650 0.85 -0.7 4,267,540 - -0.4 4,267,540 - -0.7 4,267,584 + -0.4 4,267,584 + +0.4 4,267,955 + -0.8 4,267,955 + -1.1
Or see this region's nucleotide sequence