Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS14900 and ABID97_RS14905 are separated by 184 nucleotides ABID97_RS14905 and ABID97_RS14910 are separated by 59 nucleotides
ABID97_RS14900: ABID97_RS14900 - CDP-diacylglycerol--serine O-phosphatidyltransferase, at 3,094,672 to 3,095,496
_RS14900
ABID97_RS14905: ABID97_RS14905 - 2-isopropylmalate synthase, at 3,095,681 to 3,097,384
_RS14905
ABID97_RS14910: ABID97_RS14910 - 2-isopropylmalate synthase, at 3,097,444 to 3,098,982
_RS14910
Position (kb)
3095
3096
3097
3098 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3095.510 kb on + strand at 3095.555 kb on - strand at 3095.705 kb on + strand at 3095.706 kb on - strand at 3096.062 kb on + strand, within ABID97_RS14905 at 3096.200 kb on + strand, within ABID97_RS14905 at 3096.551 kb on + strand, within ABID97_RS14905 at 3096.552 kb on - strand, within ABID97_RS14905 at 3096.653 kb on + strand, within ABID97_RS14905 at 3096.653 kb on + strand, within ABID97_RS14905 at 3096.653 kb on + strand, within ABID97_RS14905 at 3096.653 kb on + strand, within ABID97_RS14905 at 3096.654 kb on - strand, within ABID97_RS14905 at 3096.654 kb on - strand, within ABID97_RS14905 at 3096.654 kb on - strand, within ABID97_RS14905 at 3096.672 kb on - strand, within ABID97_RS14905 at 3096.739 kb on + strand, within ABID97_RS14905 at 3096.739 kb on + strand, within ABID97_RS14905 at 3096.755 kb on + strand, within ABID97_RS14905 at 3096.791 kb on + strand, within ABID97_RS14905 at 3096.792 kb on - strand, within ABID97_RS14905 at 3096.792 kb on - strand, within ABID97_RS14905 at 3096.792 kb on - strand, within ABID97_RS14905 at 3096.842 kb on + strand, within ABID97_RS14905 at 3096.842 kb on + strand, within ABID97_RS14905 at 3096.842 kb on + strand, within ABID97_RS14905 at 3096.842 kb on + strand, within ABID97_RS14905 at 3096.843 kb on - strand, within ABID97_RS14905 at 3096.980 kb on + strand, within ABID97_RS14905 at 3097.181 kb on + strand, within ABID97_RS14905 at 3097.181 kb on + strand, within ABID97_RS14905 at 3097.229 kb on + strand at 3097.230 kb on - strand at 3097.461 kb on - strand at 3097.981 kb on + strand, within ABID97_RS14910 at 3098.207 kb on - strand, within ABID97_RS14910 at 3098.207 kb on - strand, within ABID97_RS14910 at 3098.377 kb on + strand, within ABID97_RS14910 at 3098.378 kb on - strand, within ABID97_RS14910 at 3098.378 kb on - strand, within ABID97_RS14910
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 3,095,510 + -0.3 3,095,555 - +0.2 3,095,705 + -2.2 3,095,706 - -2.8 3,096,062 + ABID97_RS14905 0.22 +0.6 3,096,200 + ABID97_RS14905 0.30 -0.9 3,096,551 + ABID97_RS14905 0.51 -1.3 3,096,552 - ABID97_RS14905 0.51 -2.4 3,096,653 + ABID97_RS14905 0.57 -3.0 3,096,653 + ABID97_RS14905 0.57 -2.0 3,096,653 + ABID97_RS14905 0.57 -1.0 3,096,653 + ABID97_RS14905 0.57 -1.5 3,096,654 - ABID97_RS14905 0.57 -2.3 3,096,654 - ABID97_RS14905 0.57 -2.4 3,096,654 - ABID97_RS14905 0.57 -3.3 3,096,672 - ABID97_RS14905 0.58 -1.8 3,096,739 + ABID97_RS14905 0.62 -1.4 3,096,739 + ABID97_RS14905 0.62 -0.6 3,096,755 + ABID97_RS14905 0.63 -1.6 3,096,791 + ABID97_RS14905 0.65 +0.7 3,096,792 - ABID97_RS14905 0.65 -1.5 3,096,792 - ABID97_RS14905 0.65 -1.7 3,096,792 - ABID97_RS14905 0.65 -2.2 3,096,842 + ABID97_RS14905 0.68 -2.7 3,096,842 + ABID97_RS14905 0.68 -1.3 3,096,842 + ABID97_RS14905 0.68 -0.3 3,096,842 + ABID97_RS14905 0.68 -1.6 3,096,843 - ABID97_RS14905 0.68 -2.2 3,096,980 + ABID97_RS14905 0.76 +0.3 3,097,181 + ABID97_RS14905 0.88 +0.0 3,097,181 + ABID97_RS14905 0.88 -1.1 3,097,229 + -0.6 3,097,230 - +0.1 3,097,461 - -0.0 3,097,981 + ABID97_RS14910 0.35 +0.1 3,098,207 - ABID97_RS14910 0.50 -1.1 3,098,207 - ABID97_RS14910 0.50 -0.0 3,098,377 + ABID97_RS14910 0.61 +0.0 3,098,378 - ABID97_RS14910 0.61 +0.3 3,098,378 - ABID97_RS14910 0.61 +0.1
Or see this region's nucleotide sequence