Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS13605 and ABID97_RS13610 overlap by 4 nucleotides ABID97_RS13610 and ABID97_RS13615 overlap by 4 nucleotides ABID97_RS13615 and ABID97_RS13620 overlap by 10 nucleotides
ABID97_RS13605: ABID97_RS13605 - hydrogenase expression/formation protein HypE, at 2,835,993 to 2,837,036
_RS13605
ABID97_RS13610: ABID97_RS13610 - hydrogenase formation protein HypD, at 2,837,033 to 2,838,181
_RS13610
ABID97_RS13615: ABID97_RS13615 - HypC/HybG/HupF family hydrogenase formation chaperone, at 2,838,178 to 2,838,423
_RS13615
ABID97_RS13620: ABID97_RS13620 - carbamoyltransferase HypF, at 2,838,414 to 2,839,562
_RS13620
Position (kb)
2837
2838
2839 Strain fitness (log2 ratio)
-1
0
1
2 at 2836.207 kb on + strand, within ABID97_RS13605 at 2836.470 kb on + strand, within ABID97_RS13605 at 2836.471 kb on - strand, within ABID97_RS13605 at 2836.735 kb on + strand, within ABID97_RS13605 at 2836.736 kb on - strand, within ABID97_RS13605 at 2836.909 kb on + strand, within ABID97_RS13605 at 2836.909 kb on + strand, within ABID97_RS13605 at 2836.909 kb on + strand, within ABID97_RS13605 at 2837.024 kb on - strand at 2837.024 kb on - strand at 2837.085 kb on + strand at 2837.308 kb on - strand, within ABID97_RS13610 at 2837.348 kb on + strand, within ABID97_RS13610 at 2837.348 kb on + strand, within ABID97_RS13610 at 2837.827 kb on - strand, within ABID97_RS13610 at 2837.910 kb on + strand, within ABID97_RS13610 at 2837.910 kb on + strand, within ABID97_RS13610 at 2838.094 kb on - strand at 2838.174 kb on + strand at 2838.299 kb on + strand, within ABID97_RS13615
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 2,836,207 + ABID97_RS13605 0.20 +0.4 2,836,470 + ABID97_RS13605 0.46 -0.9 2,836,471 - ABID97_RS13605 0.46 -0.1 2,836,735 + ABID97_RS13605 0.71 -0.6 2,836,736 - ABID97_RS13605 0.71 -0.4 2,836,909 + ABID97_RS13605 0.88 +0.5 2,836,909 + ABID97_RS13605 0.88 +0.4 2,836,909 + ABID97_RS13605 0.88 -0.1 2,837,024 - +0.2 2,837,024 - +2.5 2,837,085 + -0.3 2,837,308 - ABID97_RS13610 0.24 -0.1 2,837,348 + ABID97_RS13610 0.27 +0.6 2,837,348 + ABID97_RS13610 0.27 -0.9 2,837,827 - ABID97_RS13610 0.69 +0.8 2,837,910 + ABID97_RS13610 0.76 +0.1 2,837,910 + ABID97_RS13610 0.76 +0.3 2,838,094 - +0.3 2,838,174 + +0.0 2,838,299 + ABID97_RS13615 0.49 +0.0
Or see this region's nucleotide sequence